Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1940 |
Symbol | |
ID | 6271362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1773884 |
End bp | 1774414 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641725998 |
Product | phage tail protein I |
Protein accession | YP_001880492 |
Protein GI | 187733046 |
COG category | [R] General function prediction only |
COG ID | [COG4385] Bacteriophage P2-related tail formation protein |
TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family [TIGR02242] phage tail protein domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAATT CGTTGTTACC ACCATCAGCC AGCAATTTCA TGCGTTGTGC CGAAGCCGTC GGAACACGCA TTACAGACAT TCCGGTAGAC CTCAACACGC TGTGGTCGCC GGACACCTGC CCGGTGCATC TGCTGCCTTA TCTCGCCTGG GCGTTTTCCG TTGACCGCTG GGATCGCAAC TGGCCGGAAG AGACAAAGCG ACAGGTTATT CGTGATGCAT GGCTGATACA CCGACACAAA GGGACCATCA GCGCACTGCG CCGGGCCATT GAGCCGCTGG GATACCTCAT TCGCGTGTCT GAGTGGTGGG AGTTCGGCGG AGAACCGGGA ACATTTACCG TTGAAGTCGG CACGCTGGAC AGTGGCGTGA CGGAGGAAAT GTATCTGGAA ATGGAGCGGT TGATTGCTGA TGCCCGCCCG GTCAGCCGCC ACATGACAGG GCTGAATATC ATTCAGGAAA TTCCGGGGGA TATTTTCGCA GCGGCGGCAA CTTATGACGG TGAAGTTATT ACCATTTATC CAGGCGATTA A
|
Protein sequence | MSNSLLPPSA SNFMRCAEAV GTRITDIPVD LNTLWSPDTC PVHLLPYLAW AFSVDRWDRN WPEETKRQVI RDAWLIHRHK GTISALRRAI EPLGYLIRVS EWWEFGGEPG TFTVEVGTLD SGVTEEMYLE MERLIADARP VSRHMTGLNI IQEIPGDIFA AAATYDGEVI TIYPGD
|
| |