Gene SbBS512_E1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1925 
Symbol 
ID6273151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1763997 
End bp1764518 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content54% 
IMG OID641725987 
ProductIS911, transposase orfB 
Protein accessionYP_001880481 
Protein GI187732573 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.741704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAGC CAAATCAGGT GTGGTGCGGT GATGTGACCT GTATCTGGAC GGGTAAGCGC 
TGGGCGTACC TCGCCGTTGT TCTCGACCTG TTCGCAAGAA AACCAGTGGG CTGGGCCATG 
TCGTTCTCGC CGGACAGCAG GCTCACCATG AAAGCGCTGG AAATGGCATG GGAAACCCGT 
GGTAAGCCCG GCGGGGTGAT GTTCCACAGC GATCAGGGCA GTCATTATAC GAGCAGGCAG 
TTCCGGCAGT TATTGTGGCG ATACCAGATC AGACAGAGTA TGAGCCGGCG CGGAAACTGC 
TGGGATAACA GCCCAATGGA ACGCTTCTTC AGGAGTCTGA AGAACGAATG GATGCCGGTG 
GTGGGTTACG TAAGCTTCAG CGAGGCAGCT CACGCCATAA CGGACTATAT CGTTGGATAT 
TACAGCGCAC TAAGACCGCA CGAATATAAC GGTGGGTTAC CCCCAAACGA ATCGGAAAAT 
CGATACTGGA AAAACTCTAA CTCGGTGGCC AGTTTTTGTT GA
 
Protein sequence
MTEPNQVWCG DVTCIWTGKR WAYLAVVLDL FARKPVGWAM SFSPDSRLTM KALEMAWETR 
GKPGGVMFHS DQGSHYTSRQ FRQLLWRYQI RQSMSRRGNC WDNSPMERFF RSLKNEWMPV 
VGYVSFSEAA HAITDYIVGY YSALRPHEYN GGLPPNESEN RYWKNSNSVA SFC