Gene SbBS512_E1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1924 
Symbol 
ID6272632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1763053 
End bp1763943 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID641725986 
ProductIS629 transposase orfB 
Protein accessionYP_001880480 
Protein GI187732945 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.454462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGCCAC TGCTGGATAA GCTGCGTAAG CTGTACGGGG TCGGACCGGT ATGCAGTGAA 
CTACATATTG CCCCGTCAAC GTATTACCAC TGTCAGGAAC AGCGACATCA TCCTGATAAA
CGCAGTGCCC GTGCGCAGCG CGATGACTGG CTGAAGAAAG AGATACTGCG CGTATACGAT
GGGAATCATC AGGTATACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GGAAGGTATC
AGAGTGGCCA GATGCACTGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC
CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA
AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC
AGCACATGGC AGGGCTTCGT CTATGTGGCG TTCATCATTG ATGTGTTTGC CGGATACATC
GTGGGGTGGC GGGTCTCATC GTCCATGGAA ACGACATTCG TGCTGGATGC TCTGGAGCAG
GCGTTATGGG CCCGTCGACC GTCCGGCACG GTCCATCACA GTGATAAAGG TTCTCAGTAT
GTATCGCTGG CCTACACACA GCGGCTTAAG GAAGCCGGAT TGCTGGCATC AACAGGAAGT
ACAGGCGACT CGTATGACAA CGCGATGGCG GAGAGCATCA ATGGTCTTTA CAAAGCGGAG
GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTCACGTGG
GTGGACTGGT ATAATAATCG ACGATTGCTG GAAAGGCTGG GCCATACTCC TCCGGCAGAA
GCAGAAAAAG CTTATTATGC TTCCATCGGA AACGATGATC TGGCAGCCTG A
 
Protein sequence
MMPLLDKLRK LYGVGPVCSE LHIAPSTYYH CQEQRHHPDK RSARAQRDDW LKKEILRVYD 
GNHQVYGVRK VWRQLLREGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV
NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ
ALWARRPSGT VHHSDKGSQY VSLAYTQRLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE
VIHRKSWKNR AEVELATLTW VDWYNNRRLL ERLGHTPPAE AEKAYYASIG NDDLAA