Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1923 |
Symbol | |
ID | 6271870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1762730 |
End bp | 1763056 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641725985 |
Product | IS629 transposase orfA |
Protein accession | YP_001880479 |
Protein GI | 187732478 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.968111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA ATACTCGTTT TTCCCCCGAA GTCCGTCAGA GGGCGATTCG TATGGTTCTG GAAAGTCAGG GCGAATATGA CTCACAGTGG GCGGCAATTT GTTCCATTGC CCCAAAGATT GGCTGTACAC CGGAGACTCT GCGTGTCTGG GTACGCCAGC ATGAGCGGGA TACCGGAGGC GGTGATGGCG GGCTCACCAC CGCTGAACGT CAGCGTCTGA AAGAGCTGGA ACGTGAAAAT CGTGAACTGC GCCGCAGTAA CGATATCCTT CGCCAGGCTT CCGCTTATTT TGCGAAGGCG GAGTTCGACC GCCTCTGGAA AAAGTGA
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Protein sequence | MTKNTRFSPE VRQRAIRMVL ESQGEYDSQW AAICSIAPKI GCTPETLRVW VRQHERDTGG GDGGLTTAER QRLKELEREN RELRRSNDIL RQASAYFAKA EFDRLWKK
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