Gene SbBS512_E1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1915 
SymbolbtuC 
ID6268398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1757140 
End bp1758120 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content55% 
IMG OID641725978 
Productvtamin B12-transporter permease 
Protein accessionYP_001880472 
Protein GI187731832 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4139] ABC-type cobalamin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACAC TTGCCCGCCA ACAACAGCGA CAAAATATTC GCTGGTTATT ATGCCTGTCA 
GTTTTGATGC TGCTGGCGCT TCTCTTAAGC CTTTGCGCCG GTGAACAATG GATCTCGCTA
GGTGACTGGT TTACTCCTCG TGGCGAACTG TTCGTCTGGC AAATTCGCCT GCCACGTACG
CTGGCTGTAT TGCTGGTTGG TGCGGCGCTG GCTATATCCG GCGCTGTAAT GCAGGCGTTG
TTTGAAAATC CTCTGGCAGA ACCTGGACTA CTTGGGGTCT CTAACGGCGC AGGCGTGGGG
CTTATCGCCG CGGTATTGCT TGGGCAAGGG CAACTCCCCA ACTGGGCGCT AGGGCTGTGT
GCGATTGCTG GCGCGCTTAT CATCACTTTA ATACTCTTAC GTTTCGCCCG TCGTCATCTT
TCGACCAGTC GGTTATTGCT GGCTGGCGTT GCATTAGGGA TTATCTGTAG CGCACTAATG
ACGTGGGCTA TCTACTTTTC CACCTCTGTT GATTTACGTC AGCTGATGTA CTGGATGATG
GGCGGTTTTG GCGGCGTAGA CTGGCGGCAA AGCTGGCTGA TGCTGGCATT GATCCCCGTG
TTGTTGTGGA TCTGTTGTCA GTCCAGGCCG ATGAATATGT TAGCACTTGG CGAGATCTCG
GCGCGGCAAC TGGGTTTACC CCTGTGGTTC TGGCGCAATG TGCTGGTGGC CGCGACCGGC
TGGATGGTTG GCGTCAGTGT GGCGCTGGCG GGTGCTATCG GCTTTATTGG TCTGGTGATC
CCACATATTC TTCGGTTGTG TGGTTTAACC GATCATCGCG TATTACTTCC CGGCTGCGCG
CTGGCAGGGG CGAGCGCATT GCTGCTGGCC GATATTGTAG CGCGCCTGGC ATTAGCTGCC
GCAGAGCTGC CTATTGGCGT GGTCACCGCA ACGTTGGGTG CGCCGGTGTT TATCTGGTTA
TTGTTAAAAG CAAGACGTTA G
 
Protein sequence
MLTLARQQQR QNIRWLLCLS VLMLLALLLS LCAGEQWISL GDWFTPRGEL FVWQIRLPRT 
LAVLLVGAAL AISGAVMQAL FENPLAEPGL LGVSNGAGVG LIAAVLLGQG QLPNWALGLC
AIAGALIITL ILLRFARRHL STSRLLLAGV ALGIICSALM TWAIYFSTSV DLRQLMYWMM
GGFGGVDWRQ SWLMLALIPV LLWICCQSRP MNMLALGEIS ARQLGLPLWF WRNVLVAATG
WMVGVSVALA GAIGFIGLVI PHILRLCGLT DHRVLLPGCA LAGASALLLA DIVARLALAA
AELPIGVVTA TLGAPVFIWL LLKARR