Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1915 |
Symbol | btuC |
ID | 6268398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1757140 |
End bp | 1758120 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641725978 |
Product | vtamin B12-transporter permease |
Protein accession | YP_001880472 |
Protein GI | 187731832 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4139] ABC-type cobalamin transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGACAC TTGCCCGCCA ACAACAGCGA CAAAATATTC GCTGGTTATT ATGCCTGTCA GTTTTGATGC TGCTGGCGCT TCTCTTAAGC CTTTGCGCCG GTGAACAATG GATCTCGCTA GGTGACTGGT TTACTCCTCG TGGCGAACTG TTCGTCTGGC AAATTCGCCT GCCACGTACG CTGGCTGTAT TGCTGGTTGG TGCGGCGCTG GCTATATCCG GCGCTGTAAT GCAGGCGTTG TTTGAAAATC CTCTGGCAGA ACCTGGACTA CTTGGGGTCT CTAACGGCGC AGGCGTGGGG CTTATCGCCG CGGTATTGCT TGGGCAAGGG CAACTCCCCA ACTGGGCGCT AGGGCTGTGT GCGATTGCTG GCGCGCTTAT CATCACTTTA ATACTCTTAC GTTTCGCCCG TCGTCATCTT TCGACCAGTC GGTTATTGCT GGCTGGCGTT GCATTAGGGA TTATCTGTAG CGCACTAATG ACGTGGGCTA TCTACTTTTC CACCTCTGTT GATTTACGTC AGCTGATGTA CTGGATGATG GGCGGTTTTG GCGGCGTAGA CTGGCGGCAA AGCTGGCTGA TGCTGGCATT GATCCCCGTG TTGTTGTGGA TCTGTTGTCA GTCCAGGCCG ATGAATATGT TAGCACTTGG CGAGATCTCG GCGCGGCAAC TGGGTTTACC CCTGTGGTTC TGGCGCAATG TGCTGGTGGC CGCGACCGGC TGGATGGTTG GCGTCAGTGT GGCGCTGGCG GGTGCTATCG GCTTTATTGG TCTGGTGATC CCACATATTC TTCGGTTGTG TGGTTTAACC GATCATCGCG TATTACTTCC CGGCTGCGCG CTGGCAGGGG CGAGCGCATT GCTGCTGGCC GATATTGTAG CGCGCCTGGC ATTAGCTGCC GCAGAGCTGC CTATTGGCGT GGTCACCGCA ACGTTGGGTG CGCCGGTGTT TATCTGGTTA TTGTTAAAAG CAAGACGTTA G
|
Protein sequence | MLTLARQQQR QNIRWLLCLS VLMLLALLLS LCAGEQWISL GDWFTPRGEL FVWQIRLPRT LAVLLVGAAL AISGAVMQAL FENPLAEPGL LGVSNGAGVG LIAAVLLGQG QLPNWALGLC AIAGALIITL ILLRFARRHL STSRLLLAGV ALGIICSALM TWAIYFSTSV DLRQLMYWMM GGFGGVDWRQ SWLMLALIPV LLWICCQSRP MNMLALGEIS ARQLGLPLWF WRNVLVAATG WMVGVSVALA GAIGFIGLVI PHILRLCGLT DHRVLLPGCA LAGASALLLA DIVARLALAA AELPIGVVTA TLGAPVFIWL LLKARR
|
| |