Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1913 |
Symbol | btuD |
ID | 6269382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1755777 |
End bp | 1756526 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641725976 |
Product | vitamin B12-transporter ATPase |
Protein accession | YP_001880470 |
Protein GI | 187730625 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4138] ABC-type cobalamin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTG TGATGCAGTT ACAGGATGTT GCGGAATCTA CCCGCCTGGG GCCACTTTCT GGCGAGGTTC GGGCTGGGGA GATCCTGCAC CTGGTGGGGC CGAATGGCGC GGGTAAGAGT ACCTTGCTTG CACGAATGGC CGGAATGACC AGCGGTAAGG GAAGCATTCA GTTCGCGGGG CAACCCCTGG AAGCATGGTC CGCAACAAAA CTCGCGCTGC ATCGCGCCTA TCTTTCACAA CAGCAGACGC CGCCGTTTGC AATGCCGGTC TGGCACTACC TGACACTGCA TCAGCACGAT AAAACGCGTA CCGAACTACT GAATGATGTC GCAGGGGCGC TGGCTCTTGA TGACAAACTC GGTCGTAGCA CCAATCAACT TTCCGGCGGT GAATGGCAAC GCGTACGTCT TGCTGCGGTG GTGTTGCAAA TCACACCACA AGCCAATCCC GCAGGCCAAT TGCTGCTTCT TGATGAGCCG ATGAACAGTC TTGATGTTGC GCAACAAAGT GCGTTAGACA AAATTCTGAG CGCGCTGTGT CAGCAAGGAC TGGCGATTGT GATGAGCAGT CACGATCTCA ACCACACGTT GCGTCATGCG CATCGGGCGT GGTTGCTAAA AGGTGGAAAA ATGCTGGCCA GTGGACGCAG AGAAGAGGTG CTCACGCCGC CAAATCTGGC GCAGGCCTAT GGGATGAATT TTCGCCGTCT GGATATCGAA GGTCACAGAA TGCTGATTTT GACCATCTGA
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Protein sequence | MSIVMQLQDV AESTRLGPLS GEVRAGEILH LVGPNGAGKS TLLARMAGMT SGKGSIQFAG QPLEAWSATK LALHRAYLSQ QQTPPFAMPV WHYLTLHQHD KTRTELLNDV AGALALDDKL GRSTNQLSGG EWQRVRLAAV VLQITPQANP AGQLLLLDEP MNSLDVAQQS ALDKILSALC QQGLAIVMSS HDLNHTLRHA HRAWLLKGGK MLASGRREEV LTPPNLAQAY GMNFRRLDIE GHRMLILTI
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