Gene SbBS512_E1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1910 
Symbol 
ID6273200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1752776 
End bp1754212 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content52% 
IMG OID641725973 
Producthypothetical protein 
Protein accessionYP_001880467 
Protein GI187732402 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGT CTTTTGTTAC CCGCTGGCGC GATGAATTGC CAGAAACCTA TACAGCACTT 
TCCCCTACGC CTTTAAATAA TGCCCGGCTG GTTTGGCATA ATACCGAACT GGCTAACACG
CTGAGTATTC CATCGTCGCT GTTTAAAAAT GGCGCAGGTG TCTGGGGCGG CGAAGCCCTA
CTGCCTGGTA TGTCACCACT GGCGCAGGTT TACAGTGGTC ATCAGTTCGG CGTCTGGGCG
GGCCAACTGG GTGATGGGCG CGGCATTTTA CTCGGCGAAC AACTGCTTGC TGATGGCACT
ACAATGGACT GGCATCTGAA AGGTGCTGGC CTGACGCCTT ATTCGCGAAT GGGTGATGGA
CGGGCGGTTT TACGTTCGAC GATACGAGAA AGTCTCGCCA GTGAGGCGAT GCATTATCTG
GGCATTCCGA CGACCCGCGC GTTAAGTATC GTCACCAGCG ATTCGCCAGT GTATCGGGAA
ACGGCGGAGC CAGGCGCGAT GCTGATGCGT GTGGCACCAA GTCATCTGCG CTTTGGTCAT
TTCGAACATT TTTACTACCG CCGCGAGTCG GAAAAGGTTC GTCAGTTAGC TGACTTTGCT
ATTCGTCATT ACTGGTCACA TCTTGAAGAT GATGAGGACA AATACCGTCT CTGGTTTAGC
GATGTTGTCG CACGTACCGC GTCGTTAATT GCCCAATGGC AGACGGTCGG CTTTGCACAT
GGGGTGATGA ATACCGACAA CATGTCGCTG CTGGGACTGA CGCTTGATTA CGGGCCGTTT
GGTTTTCTTG ATGATTACGA ACCCGGTTTT ATTTGTAATC ACTCGGATCA TCAAGGGCGT
TATAGCTTTG ATAATCAACC TGCTGTCGCG TTGTGGAATT TACAGCGTCT GGCGCAGACA
TTGTCACCAT TTGTTGCCGT AGATGCCCTG AATGAGGCCC TGGACAGCTA TCAGCAGGTT
TTGTTGACGC ATTATGGACA ACGGATGCGG CAGAAACTGG GCTTCATGAC GGAGCAAAAA
GAGGATAACG CGCTACTGAA TGAATTATTC AGTCTGATGG CGCGAGAGCG CAGCGATTAT
ACCCGCACAT TCCGCATGCT GAGTCTGACC GAGCAGCACA GCGCGGCGTC ACCGCTACGT
GATGAGTTTA TTGATCGTGC GGCATTTGAT GACTGGTTTG CCCGTTATCG GGGGCGTTTG
CAACAAGACG AGGTTAGCGA TAGTGAGCGT CAGCAACTGA TGCAAAGCGT TAACCCAGCT
CTGGTATTGC GCAACTGGTT GGCGCAACGG GCGATTGAAG CGGCAGAAAA GGGTGATATG
ATGGAATTGC ACCGCCTGCA TGAGGCGTTG CGAAATCCTT TCAGCGACAG AGATGATGAC
TATGTCAGTC GTCCACCTGA CTGGGGTAAA CGGCTGGAAG TCAGCTGCTC GAGTTAA
 
Protein sequence
MTLSFVTRWR DELPETYTAL SPTPLNNARL VWHNTELANT LSIPSSLFKN GAGVWGGEAL 
LPGMSPLAQV YSGHQFGVWA GQLGDGRGIL LGEQLLADGT TMDWHLKGAG LTPYSRMGDG
RAVLRSTIRE SLASEAMHYL GIPTTRALSI VTSDSPVYRE TAEPGAMLMR VAPSHLRFGH
FEHFYYRRES EKVRQLADFA IRHYWSHLED DEDKYRLWFS DVVARTASLI AQWQTVGFAH
GVMNTDNMSL LGLTLDYGPF GFLDDYEPGF ICNHSDHQGR YSFDNQPAVA LWNLQRLAQT
LSPFVAVDAL NEALDSYQQV LLTHYGQRMR QKLGFMTEQK EDNALLNELF SLMARERSDY
TRTFRMLSLT EQHSAASPLR DEFIDRAAFD DWFARYRGRL QQDEVSDSER QQLMQSVNPA
LVLRNWLAQR AIEAAEKGDM MELHRLHEAL RNPFSDRDDD YVSRPPDWGK RLEVSCSS