Gene SbBS512_E1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1908 
SymbolaroH 
ID6270019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1751403 
End bp1752449 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID641725971 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001880465 
Protein GI187733586 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.749185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAA CTGACGAACT CCGTACTGCG CGTATTGAGA GCCTGGTAAC GCCCGCCGAA 
CTCGCGCTAC GGTATCCCGT AACGCCTGGC GTCGCCACCC ATGTCACCGA CTCCCGCCGC
AGAATTGAAA AAATACTGAA TGGTGAAGAT AAGCGACTGT TGGTCATTAT TGGCCCCTGC
TCGATCCACG ATCTCACCGC TGCAATGGAG TACGCCACCC GTCTGCAGTC GCTGCGCAAC
CAGTACCAGT CACGGCTGGA AATCGTAATG CGCACCTATT TTGAAAAACC ACGAACTGTT
GTCGGCTGGA AAGGGCTAAT CTCCGATCCG GATTTAAACG GCAGCTATCG GGTAAATCAC
GGTCTGGAGC TGGCGCGCAA ATTACTTTTA CAGGTAAATG AGCTGGGTGT CCCTACCGCG
ACTGAGTTTC TCGATATGGT GACCGGTCAG TTTATTGCTG ATTTAATCAG TTGGGGCGCG
ATTGGCGCTC GTACTACCGA AAGTCAGATC CACCGCGAAA TGGCTTCAGC ACTCTCCTGT
CCGGTAGGTT TTAAAAATGG TACCGATGGC AACACGCGGA TTGCCGTGGA TGCTATCCGC
GCAGCCCGCG CTAGCCATAT GTTCCTCTCG CCAGACAAAA ATGGTCAGAT GACCATCTAT
CAGACCAGCG GCAACCCGTA TGGCCACATT ATTATGCGTG GCGGCAAAAA ACCGAATTAT
CATGCCGATG ATATCGCCGC AGCCTGCGAT ACGCTGCACG AGTTTGATTT ACCTGAACAT
CTGGTGGTGG ATTTCAGCCA CGGTAACTGC CAGAAGCAGC ACCGTCGCCA GTTAGAAGTT
TGTGAGGATA TTTGTCAGCA AATCCGCAAT GGCTCTACGG CGATTGCTGG AATTATGGCG
GAAAGTTTCC TGCGCGAAGG AGCGCAAAAA ATCGTCGGCG GTCAGCCGCT CACTTACGGT
CAATCCATTA CCGACCCGTG TCTGGACTGG GAAGATACCG AACGCCTGGT CGAAAAACTC
GCCTCTGCGG TAGATACCCG CTTCTGA
 
Protein sequence
MNRTDELRTA RIESLVTPAE LALRYPVTPG VATHVTDSRR RIEKILNGED KRLLVIIGPC 
SIHDLTAAME YATRLQSLRN QYQSRLEIVM RTYFEKPRTV VGWKGLISDP DLNGSYRVNH
GLELARKLLL QVNELGVPTA TEFLDMVTGQ FIADLISWGA IGARTTESQI HREMASALSC
PVGFKNGTDG NTRIAVDAIR AARASHMFLS PDKNGQMTIY QTSGNPYGHI IMRGGKKPNY
HADDIAAACD TLHEFDLPEH LVVDFSHGNC QKQHRRQLEV CEDICQQIRN GSTAIAGIMA
ESFLREGAQK IVGGQPLTYG QSITDPCLDW EDTERLVEKL ASAVDTRF