Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1905 |
Symbol | ppsA |
ID | 6272037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1746370 |
End bp | 1748748 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641725968 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_001880462 |
Protein GI | 187733162 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAACA ATGGCTCGTC ACCGCTGGTG CTTTGGTACA ACCAACTCGG CATGAATGAT GTAGACAGGG TTGGGGGCAA AAATGCCTCC CTGGGTGAAA TGATTACTAA CCTTTCCGGA ATGGGCGTTT CCGTTCCGAA TGGTTTCGCC ACAACCGCCG ACGCGTTTAA CCAGTTTCTG GACCAAAGCG GCGTAAACCA GCGCATTTAT GAACTGCTGG ATAAAACGGA TATTGACGAT GTTACTCAGC TTGCGAAAGC GGGCGCGCAA ATCCGCCAGT GGATTATCGA CACTCCCTTC CAGGCTGAGC TGGAAAACGC CATCCGCGAA GCCTATGCTC AGCTTTCCGC CGATGACGAA AACGCCTCTT TTGCGGTGCG CTCCTCCGCC ACCGCAGAAG ATATGCCGGA CGCTTCCTTT GCCGGTCAGC AGGAAACCTT CCTCAACGTT CAGGGGTTTG ACGCCGTTCT CGTGGCAGTG AAACATGTAT TTGCTTCTCT GTTTAACGAT CGCGCCATCT CTTATCGTGT GCACCAGGGT TACGATCACC GTGGCGTGGC GCTCTCCGCC GGTGTTCAGC GGATGGTGCG CTCCGACCTC GCATCTTCTG GCGTGATGTT CTCCATTGAT ACCGAATCCG GCTTTGACCA GGTGGTGTTT ATCACTTCCG CATGGGGCCT TGGTGAGATG GTCGTGCAGG GGGCGGTTAA CCCGGATGAG TTTTACGTGC ATAAACCGAC ACTGGCGGCG AATCGCCCGG CTATCGTGCG CCGCACCATG GGGTCGAAAA AAATCCGCAT GGTTTACGCG CCGACCCAGG AGCACGGCAA GCAGGTTAAA ATCGAAGACG TACCGCAGGA ACAGCGTGAC ATCTTCTCGC TGACCAACGA AGAAGTGCAG GAACTGGCAA AACAGGCCGT ACAAATTGAG AAACACTACG GTCGCCCGAT GGATATTGAG TGGGCGAAAG ATGGCCACAC CGGCAAACTG TTCATTGTGC AGGCGCGTCC GGAAACCGTG CGCTCACGCG GTCAGGTCAT GGAGCGTTAT ACGCTGCATT CACAGGGTAA GATTATCGCC GAAGGCCGTG CTATCGGTCA TCGCATCGGT GCGGGTCCGG TGAAAGTCAT CCATGACATC AGCGAAATGA ACCGCATCGA ACCTGGTGAC GTGCTGGTCA CTGACATGAC CGACCCGGAC TGGGAACCGA TCATGAAGAA AGCATCTGCC ATCGTCACCA ACCGTGGCGG TCGTACCTGT CACGCGGCGA TCATCGCTCG TGAACTGGGT ATTCCGGCGG TAGTGGGCTG TGGTGATGCA ACAGAACGGA TGAAAGACGG TGAGAACGTC ACTGTTTCTT GTGCCGAAGG TGATACCGGT TACGTCTATG CGGAGTTGCT GGAATTTAGC GTGAAAAGCT CCAGCGTAGA AACCATGCCG GATCTGCCGT TGAAAGTGAT GATGAACGTC GGTAACCCGG ATCGAGCTTT CGACTTCGCC TGTCTGCCGA ACAAAGGCGT GGGACTTGCG CGTCTGGAAT TTATCATCAA CCGTATGATT GGCGTCCACC CACGCGCACT GCTTGAGTTT GACGATCAGG AACCGCAGTT GCAAAACGAA ATCCGCGAGA TGATGAAAGG TTTTGATTCT CCGCGTGAAT TTTACGTTGG TCGTCTGACT GAAGGGATCG CGACGCTGGG TGCCGCGTTT TATCCGAAGC GCGTCATTGT CCGTCTCTCT GATTTTAAAT CGAACGAATA TGCCAACCTG GTCGGTGGTG AGCGTTACGA GCCAGATGAA GAGAACCCGA TGCTCGGCTT CCGTGGCGCG GGCCGCTATG TTTCCGACAG CTTCCGCGAC TGCTTCGCGC TGGAGTGTGA AGCAGTGAAA CGTGTGCGCA ACGACATGGG GCTGACCAAC GTTGAGATCA TGATCCCGTT CGTGCGTACC GTAGACCAGG CGAAAGCGGT GGTTGAAGAA CTGGCGCGTC AGGGGCTGAA GCGTGGTGAG AACGGGCTGA AAATCATCAT GATGTGTGAA ATCCCGTCCA ACGCCTTGCT GGCCGAGCAG TTCCTCGAAT ATTTCGACGG CTTCTCAATT GGCTCAAACG ACATGACGCA GTTGGCGCTC GGTCTGGATC GTGACTCCGG CGTGGTGTCT GAACTGTTCG ATGAGCGCAA CGATGCGGTG AAAGCATTGC TGTCGATGGC TATCCGTGCC GCGAAGAAAC AGGGCAAATA TGTCGGGATT TGCGGTCAGG GTCCGTCCGA CCACGAAGAT TTTGCCGCAT GGTTGATGGA AGAGGGGATC GATAGCCTGT CTCTGAATCC GGACACCGTG GTGCAAACCT GGTTAAGCCT GGCTGAACTG AAGAAATAA
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Protein sequence | MSNNGSSPLV LWYNQLGMND VDRVGGKNAS LGEMITNLSG MGVSVPNGFA TTADAFNQFL DQSGVNQRIY ELLDKTDIDD VTQLAKAGAQ IRQWIIDTPF QAELENAIRE AYAQLSADDE NASFAVRSSA TAEDMPDASF AGQQETFLNV QGFDAVLVAV KHVFASLFND RAISYRVHQG YDHRGVALSA GVQRMVRSDL ASSGVMFSID TESGFDQVVF ITSAWGLGEM VVQGAVNPDE FYVHKPTLAA NRPAIVRRTM GSKKIRMVYA PTQEHGKQVK IEDVPQEQRD IFSLTNEEVQ ELAKQAVQIE KHYGRPMDIE WAKDGHTGKL FIVQARPETV RSRGQVMERY TLHSQGKIIA EGRAIGHRIG AGPVKVIHDI SEMNRIEPGD VLVTDMTDPD WEPIMKKASA IVTNRGGRTC HAAIIARELG IPAVVGCGDA TERMKDGENV TVSCAEGDTG YVYAELLEFS VKSSSVETMP DLPLKVMMNV GNPDRAFDFA CLPNKGVGLA RLEFIINRMI GVHPRALLEF DDQEPQLQNE IREMMKGFDS PREFYVGRLT EGIATLGAAF YPKRVIVRLS DFKSNEYANL VGGERYEPDE ENPMLGFRGA GRYVSDSFRD CFALECEAVK RVRNDMGLTN VEIMIPFVRT VDQAKAVVEE LARQGLKRGE NGLKIIMMCE IPSNALLAEQ FLEYFDGFSI GSNDMTQLAL GLDRDSGVVS ELFDERNDAV KALLSMAIRA AKKQGKYVGI CGQGPSDHED FAAWLMEEGI DSLSLNPDTV VQTWLSLAEL KK
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