| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1904 |
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| Symbol | fadK |
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| ID | 6272647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1744667 |
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| End bp | 1746313 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641725967 |
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| Product | short chain acyl-CoA synthetase |
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| Protein accession | YP_001880461 |
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| Protein GI | 187731948 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.850786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGA CATTAACGTT CAACGAACAA CGTCGTGCGG CGTATCGTCA GCAAGGGTTA
TGGGGCGATG CTTCACTGGC CGATTACTGG CAGCAGACCG CTCGTGCGAT GCCAGACAAA
ATTGCCGTGG TCGACAATCA TGGTGCAACG TACACCTATA GCGCGCTCGA TCACGCCTTG
AGCTGTCTGG CAAACTGGAT GTTAGCGAAG GGTATTGAAT CAGGCGATCG CATCGCATTT
CAACTGCCTG GCTGGTGTGA ATTTACCGTT ATCTATCTTG CCTGCCTGAA AATCGGTGCG
GTTTCCGTGC CGCTGTTGCC TTCCTGGCGG GAAGCAGAAC TGGTGTCGGT GCTCAATAAG
TGTCAGGCAA AAATGTTCTT TGCACCGACG TTGTTTAAAC AAACACGTCC GGTAGATTTA
ATCCTGCCGC TGCAAAATCA GCTTCCACAA CTACAACAAA TTGTCGGCGT GGACAAACTG
GCTCCCGCCA CCTCTTCCCT CTCATTAAGT CCGATTATCG CCGACAATAC CTCACTGACC
ACGGCGATAA CGACCCACGG CGATGAATTA GCTGCGGTGC TGTTTACCTC CGGAACCGAG
GGTCTGCCAA AGGGCGTGAT GCTAACGCAT AACAATATTC TCGCCAGTGA GCGGGCTTAT
TGCGCGCGAC TGAATCTGAC CTGGCAGGAT GTCTTTATGA TGCCTGCGCC ACTTGGTCAC
GCAACGGGCT TTCTGCATGG CGTAACGGCA CCATTCTTAA TTGGCGCTCG CAGCGTGTTG
TTAGATATTT TCACTCCTGA TGCGTGTCTC GCGCTGCTTG AGCAGCAGCG TTGCACCTGT
ATGCTAGGCG CAACGCCGTT TGTCTATGAT CTTTTGAATG TACTAGAGAA ACAACCCGCG
GACCTTTCAG CGCTGCGTTT CTTTCTTTGC GGCGGTACCA CAATCCCCAA AAAAGTGGCA
CGTGAATGCC AGCAGCGCGG CATTAAATTA TTAAGTGTTT ATGGTTCCAC AGAAAGTTCG
CCGCATGCGG TGGTGAATCT CGATGATCCT TTGTCGCGCT TTATGCACAC CGATGGTTAC
GCTGCCGCAG GTGTAGAGAT TAAAGTGGTC GATGACGCAC GCAAGACCTT ACCGCCAGGT
TGCGAAGGTG AAGAAGCCTC GCGTGGCCCC AATGTGTTTA TGGGGTATTT TGATGAACCT
GAATTAACCG CCCGTGCGCT GGACGAAGAA GGCTGGTATT GCAGCGGCGA TCTCTGCCGT
ATGGATGAGG CTGGCTATAT AAAAATTACC GGACGCAAAA AAGATATTAT TGTCCGCGGC
GGCGAAAATA TTAGCAGCCG TGAAGTGGAA GATATTTTAT TGCAGCATCC TAAAATTCAC
GATGCCTGTG TGGTTGCAAT GCCCGATGAA CGTTTAGGTG AACGATCATG CGCTTATGTC
GTGCTGAAAG CGCCGCATCA TTCATTATCG CTGGAAGAGG TGGTGGCTTT TTTTAGCCGT
AAACGGGTCG CAAAATATAA ATATCCTGAA CATATCGTGG TAATCGAAAA ACTACCGCGC
ACTGCCTCAG GTAAAATACA AAAGTTTTTG TTAAGAAAAG ATATTATGCG GCGATTAACG
CAGGATGTCT GTGAAGAGAT TGAATAA
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| Protein sequence | MKVTLTFNEQ RRAAYRQQGL WGDASLADYW QQTARAMPDK IAVVDNHGAT YTYSALDHAL
SCLANWMLAK GIESGDRIAF QLPGWCEFTV IYLACLKIGA VSVPLLPSWR EAELVSVLNK
CQAKMFFAPT LFKQTRPVDL ILPLQNQLPQ LQQIVGVDKL APATSSLSLS PIIADNTSLT
TAITTHGDEL AAVLFTSGTE GLPKGVMLTH NNILASERAY CARLNLTWQD VFMMPAPLGH
ATGFLHGVTA PFLIGARSVL LDIFTPDACL ALLEQQRCTC MLGATPFVYD LLNVLEKQPA
DLSALRFFLC GGTTIPKKVA RECQQRGIKL LSVYGSTESS PHAVVNLDDP LSRFMHTDGY
AAAGVEIKVV DDARKTLPPG CEGEEASRGP NVFMGYFDEP ELTARALDEE GWYCSGDLCR
MDEAGYIKIT GRKKDIIVRG GENISSREVE DILLQHPKIH DACVVAMPDE RLGERSCAYV
VLKAPHHSLS LEEVVAFFSR KRVAKYKYPE HIVVIEKLPR TASGKIQKFL LRKDIMRRLT
QDVCEEIE
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