Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1869 |
Symbol | |
ID | 6268967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1712365 |
End bp | 1713177 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641725934 |
Product | hypothetical protein |
Protein accession | YP_001880430 |
Protein GI | 187733983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.163496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATTA CACGAGCAGA CCTGCGAGAA TGGCGTATCG GAGCGGTGAT GTATCGCTGG TTCCTGCGCC ATTTCCGACG CGGCGGTAGT TATGCCGATA TTCATCATGC ACTGATTGAG GAAGGATATA CGGACTGGGC GGAGAGTCTG GTTGAGTATG CGTGGAAAAA ATGGCTGGCG GATGAAAACT TCGCGCATCA GGAAGTTTCC TCTATGCAAA AACTGGCCAC AGACCCCGGA GAGATACCAT TTTGCAGTCA GTTTGCCCGC AGCGACGATC ATGCTCGCAT CGGCTGTTGT GAGGATAACG CCCGAATCGC AATCGCTGGG TATGCCGCGC AAATTGCCAG TATGGGTTAT AGCGTGCGGA TTGGAAGTGT CGGCTTTAAC AGTCACATTG GCAGCTCCGG TGAACGCGCA CGGGTTGCTG TAACCGGTAA TTCTTCGCGG ATAAGCAGCG CTGGAGATAG TAGTCGGATT GCGAATACCG GAATGCGAGT ACGCGTTTGT ACATTGGGTG AACGGTGTCA TGTCGCCAGT AATGGTGACC TGGTGCAAAT CGCCAGCTTT GGCGCAAACG CCAGAATTGC CAACAGCGGC GACAATGTAC ACATCATTGC CAGCGGTGAA AATTCAACGG TAGTGAGCAC GGGCGTGGTC GACTCAATTA TTCTCGGGCC AGGGGGAAGC GCCGCACTGG CATATCATGA CGGCGAAAGA GTTCGCTTCG CCGTCGCCAT TGAAGGTGAA AACAATATTC GAACCGGAGT CCGCTATCGT CTTAATGAAC AGCATCAGTT TGTTGAGTGC TGA
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Protein sequence | MIITRADLRE WRIGAVMYRW FLRHFRRGGS YADIHHALIE EGYTDWAESL VEYAWKKWLA DENFAHQEVS SMQKLATDPG EIPFCSQFAR SDDHARIGCC EDNARIAIAG YAAQIASMGY SVRIGSVGFN SHIGSSGERA RVAVTGNSSR ISSAGDSSRI ANTGMRVRVC TLGERCHVAS NGDLVQIASF GANARIANSG DNVHIIASGE NSTVVSTGVV DSIILGPGGS AALAYHDGER VRFAVAIEGE NNIRTGVRYR LNEQHQFVEC
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