| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1854 |
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| Symbol | |
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| ID | 6269438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1697290 |
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| End bp | 1698459 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641725919 |
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| Product | transporter, major facilitator family |
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| Protein accession | YP_001880417 |
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| Protein GI | 187730588 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000789042 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA ACTATCCGTT GCTGGCGCTG GCGATTGGCG CGTTTGGTAT CGGGACAACG
GAGTTCTCGC CAATGGGCTT GTTGCCCGTC ATTGCGCGCG GTGTGGATGT CTCGATTCCC
GCTGCCGGAA TGTTAATCAG TGCCTATGCA GTTGGCGTAA TGGTTGGCGC GCCGCTGATG
ACGCTTCTAC TTTCTCATCG TGCCCGCCGC AGTGCGTTGA TTTTCCTGAT GGCAATTTTC
ACGCTCGGCA ACGTACTTTC CGCCATCGCG CCGGATTATA TGACCCTGAT GCTTTCACGC
ATTTTGACCA GCCTGAATCA CGGAGCATTT TTTGGTTTGG GTTCAGTCGT GGCCGCAAGC
GTGGAGCCAA AACATAAACA GGCCAGCGCA GTTGCCACTA TGTTTATGGG GTTAACCCTG
GCAAATATCG GTGGCGTGCC GGCGGCGACC TGGTTGGGTG AAACCATCGG CTGGCGGATG
TCATTTCTGG CAACGGCGGG GCTGGGAGTG ATTTCAATGG TAAGTCTGTT CTTCTCATTA
CCTAAAGGTG GTGCAGGGGC ACGACCTGAA GTGAAAAAAG AGCTGGCGGT ATTAATGCGT
CCGCAGGTGC TGTCTGCATT GCTGACGACG GTACTGGGAG CTGGTGCAAT GTTTACTCTC
TACACCTATA TCTATCCGGT ACTGCAAAGT ATTACCCACG CAACACCGGT GTTCGTCACG
GCAATGCTGG TGCTGATTGG TGTCGGATTC TCTATCGGTA ACTATCCCGG CGGCAAACTG
GCAGATCGTT CAGTTAACGG CACGTTGAAA GGCTTTTTGT TGTTGTTGAT GGTGATTATG
CTGGCAATCC CGTTCCTGGC CCGCAATGAG TTCGGCGCAG CTATTAGCAT GGTGGTGTGG
GGCGCAGCAA CCTTTGCGGT CGTACCGCCG TTACAGATGC GCGTGATGCG TGTCGCCAGT
GAAGCGCCAG GTCTGTCTTC ATCAGTCAAT ATTGGTGCCT TTAATCTTGG AAATGCGCTG
GGAGCAGCTG CTGGTGGTGC GGTAATTTCC GCTGGGCTGG GATACAGCTT TGTGCCGGTG
ATGGGAGCGA TTGTCGCGGG ACTGGCATTA TTGCTGGTGT TTATGTCAGC CAGAAAACAA
CCTGAAACAG TTTGCGTTGC TAACAGCTAA
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| Protein sequence | MKINYPLLAL AIGAFGIGTT EFSPMGLLPV IARGVDVSIP AAGMLISAYA VGVMVGAPLM
TLLLSHRARR SALIFLMAIF TLGNVLSAIA PDYMTLMLSR ILTSLNHGAF FGLGSVVAAS
VEPKHKQASA VATMFMGLTL ANIGGVPAAT WLGETIGWRM SFLATAGLGV ISMVSLFFSL
PKGGAGARPE VKKELAVLMR PQVLSALLTT VLGAGAMFTL YTYIYPVLQS ITHATPVFVT
AMLVLIGVGF SIGNYPGGKL ADRSVNGTLK GFLLLLMVIM LAIPFLARNE FGAAISMVVW
GAATFAVVPP LQMRVMRVAS EAPGLSSSVN IGAFNLGNAL GAAAGGAVIS AGLGYSFVPV
MGAIVAGLAL LLVFMSARKQ PETVCVANS
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