Gene SbBS512_E1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1844 
Symbolrnt 
ID6271264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1685658 
End bp1686305 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content54% 
IMG OID641725910 
Productribonuclease T 
Protein accessionYP_001880408 
Protein GI187731741 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATA ACGCTCAACT TACCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTT 
GTGATCGATG TTGAAACAGC CGGATTTAAC GCCAAAACCG ATGCGCTGCT TGAGATTGCC 
GCCATCACCC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACACCAC ATTACATTTC 
CACGTCGAAC CATTTGTCGG CGCAAATTTG CAACCAGAAG CCCTCGCCTT CAACGGCATT 
GACCCGAACG ATCCCGATCG CGGCGCGGTC AGCGAATACG AGGCGCTGCA CGAAATTTTT 
AAAGTTGTAC GTAAAGGTAT TAAAGCGAGC GGCTGTAACC GCGCCATTAT GGTGGCGCAC 
AATGCCAATT TTGATCACAG CTTTATGATG GCCGCCGCAG AACGCGCCTC ACTTAAACGT 
AACCCGTTCC ACCCTTTCGC CACTTTTGAC ACTGCTGCAC TGGCCGGGCT GGCACTCGGA 
CAAACCGTAT TGTCAAAGGC TTGCCAGACC GCTGGCATGG ACTTCGACAG CACCCAGGCG 
CACTCCGCGC TGTACGACAC CGAACGCACT GCTGTGCTGT TTTGTGAAAT CGTCAACCGC 
TGGAAACGTC TGGGAGGCTG GCCGCTACCT GCCGCCGAAG AGGTGTAA
 
Protein sequence
MSDNAQLTGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDTTLHF 
HVEPFVGANL QPEALAFNGI DPNDPDRGAV SEYEALHEIF KVVRKGIKAS GCNRAIMVAH 
NANFDHSFMM AAAERASLKR NPFHPFATFD TAALAGLALG QTVLSKACQT AGMDFDSTQA 
HSALYDTERT AVLFCEIVNR WKRLGGWPLP AAEEV