Gene SbBS512_E1817 details

Gene Information

• Locus tag: SbBS512_E1817
• Symbol: rnfB
• ID: 6271455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1662978
• End bp: 1663556
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641725885
• Product: electron transport complex protein RnfB
• Protein accession: YP_001880383
• Protein GI: 187733860
• COG category: [C] Energy production and conversion
• COG ID: [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
• TIGRFAM ID: [TIGR01944] electron transport complex, RnfABCDGE type, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.0338518
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCTA TCTGGATTGC CGTTGCCGCC GTGAGCCTGC TGGGCCTGGC GTTTGGCGCC 
ATTCTGGGTT ATGCCTCCCG CCGTTTTGCG GTGGAAGACG ATCCGGTCGT TGAGAAAATT 
GACAAAATCT TACCGCAGAG CCAGTGTGCT CAGTGCGGTT ATCCCGGCTG TCGCCCCTAC 
GCGGAAGCCA TCAGCTGTAA CGGTGAAAAA ATCAACCGTT GCGCCCCAGG TGGCGAAGCT 
GTGATGCTAA AAATTGCCGA GTTGCTTAAT GTCGAGCCGC AGCCGCTGGA TGGCGAAGCG 
CAAGAGCTAA CGCCTGCGCG GATGGTGGCG GTTATTGATG AAAATAACTG TATTGGCTGC 
ACTAAATGTA TTCAGGCTTG TCCGGTAGAC GCCATCGTTG GCGCTACCCG TGCCATGCAT 
ACGGTAATGA GTGATCTCTG TACGGGCTGC AATTTATGTG TTGATCCGTG CCCGACGCAC 
TGCATCTCGT TGCAACCGGT CGCAGAAACA CCTGACTCCT GGAAATGGGA TCTGAACACC 
ATTCCCGTGC GTATCATTCC CGTGGAACAC CATGCTTAA 

 

Protein sequence

MNAIWIAVAA VSLLGLAFGA ILGYASRRFA VEDDPVVEKI DKILPQSQCA QCGYPGCRPY 
AEAISCNGEK INRCAPGGEA VMLKIAELLN VEPQPLDGEA QELTPARMVA VIDENNCIGC 
TKCIQACPVD AIVGATRAMH TVMSDLCTGC NLCVDPCPTH CISLQPVAET PDSWKWDLNT 
IPVRIIPVEH HA