Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1795 |
Symbol | rstB |
ID | 6271837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1638977 |
End bp | 1640278 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641725865 |
Product | sensor protein RstB |
Protein accession | YP_001880363 |
Protein GI | 187731289 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0023579 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TGTTTATCCA GTTTTACCTG TTATTGTTTG TCTGCTTCCT TGTGATGTCT CTGCTGGTTG GGTTGGTGTA CAAATTTACC GCCGAACGCG CGGGCAAACA GTCGCTGGAT GATTTGATGA ACAGTTTGCT GTATCTGATG CGCAGCGAAT TGCGTGAGAT CCCCCCACAC GACTGGGGTA AGACGCTGAA AGAGATGGAT TTAAATCTCT CTTTCGATCT GCGTGTCGAG CCACTGAGTA AATACCATCT TGATGATATT TCCATGCACC GACTGCGTGG CGGCGAAATT GTCGCCCTGG ACGATCAGTA CACGTTTTTG CAGCGTATCC CGCGCAGCCA CTACGTGCTG GCAGTTGGTC CTGTTCCTTA TCTTTATTAT CTCCATCAGA TGCGATTGCT GGATATCGCC CTGATCGCTT TTATTGCTAT TTCCCTCGCC TTTCCGGTGT TTATCTGGAT GCGTCCGCAC TGGCAGGATA TGTTAAAACT GGAAGCAGCG GCGCAACGAT TTGGCGATGG GCATCTCTAT GAGCGTATCC ACTTTGATGA GGGTTCGAGC TTTGAACGAC TTGGTATCGC ATTTAACCAG ATGGCGGACA ATATCAACGC CTTGATTGCC AGCAAAAAAC AGCTTATTGA CGGTATCGCT CACGAACTGC GAACACCGTT AGTGCGCCTG TGTTATCGAC TGGAGATGAG CGATAACCTG AGCGCCGCCG AGTCCCAGGC GTTGAATCGT GATATCAGTC AACTTGAAGC TTTAATTGAA GAGCTGCTGA CTTATGCCCG ACTCGATCGC CCACAAAACG AGCTTCATCT TAGCGAACCA GACCTGCCGT TGTGGCTGTC AACGCATCTG GCAGATATTC AGGCAGTAAC GCCCGATAAA ACGGTACGGA TAAAAACGCT CGTGCAAGGC CATTATGCGG CGTTGGATAT GCGCTTAATG GAGCGCGTGC TGGATAATTT GCTCAATAAC GCCCTGCGGT ACTGCCATTC AACGGTTGAA ACCAGCCTGC TACTGTCGGG GAATAGAGCG ACATTAATTG TTGAGGATGA TGGCCCAGGG ATTGCCCCAG AAAACCGCGA ACATATCTTT GAACCTTTTG TTCGCCTCGA TCCCAGCCGG GATCGCTCAA CCGGCGGCTG CGGGCTGGGG CTGGCAATTG TCCACTCTAT AGCACTGGCA ATGGGCGGTA CGGTTAATTG TGACACCAGC GAACTGGGTG GTGCTCGCTT CTCGTTTAGC TGGCCGTTAT GGCATAACAT CCCGCAATTT ACCTCTGCCT GA
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Protein sequence | MKKLFIQFYL LLFVCFLVMS LLVGLVYKFT AERAGKQSLD DLMNSLLYLM RSELREIPPH DWGKTLKEMD LNLSFDLRVE PLSKYHLDDI SMHRLRGGEI VALDDQYTFL QRIPRSHYVL AVGPVPYLYY LHQMRLLDIA LIAFIAISLA FPVFIWMRPH WQDMLKLEAA AQRFGDGHLY ERIHFDEGSS FERLGIAFNQ MADNINALIA SKKQLIDGIA HELRTPLVRL CYRLEMSDNL SAAESQALNR DISQLEALIE ELLTYARLDR PQNELHLSEP DLPLWLSTHL ADIQAVTPDK TVRIKTLVQG HYAALDMRLM ERVLDNLLNN ALRYCHSTVE TSLLLSGNRA TLIVEDDGPG IAPENREHIF EPFVRLDPSR DRSTGGCGLG LAIVHSIALA MGGTVNCDTS ELGGARFSFS WPLWHNIPQF TSA
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