| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1795 |
|---|
| Symbol | rstB |
|---|
| ID | 6271837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 1638977 |
|---|
| End bp | 1640278 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641725865 |
|---|
| Product | sensor protein RstB |
|---|
| Protein accession | YP_001880363 |
|---|
| Protein GI | 187731289 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0023579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGTTTATCCA GTTTTACCTG TTATTGTTTG TCTGCTTCCT TGTGATGTCT
CTGCTGGTTG GGTTGGTGTA CAAATTTACC GCCGAACGCG CGGGCAAACA GTCGCTGGAT
GATTTGATGA ACAGTTTGCT GTATCTGATG CGCAGCGAAT TGCGTGAGAT CCCCCCACAC
GACTGGGGTA AGACGCTGAA AGAGATGGAT TTAAATCTCT CTTTCGATCT GCGTGTCGAG
CCACTGAGTA AATACCATCT TGATGATATT TCCATGCACC GACTGCGTGG CGGCGAAATT
GTCGCCCTGG ACGATCAGTA CACGTTTTTG CAGCGTATCC CGCGCAGCCA CTACGTGCTG
GCAGTTGGTC CTGTTCCTTA TCTTTATTAT CTCCATCAGA TGCGATTGCT GGATATCGCC
CTGATCGCTT TTATTGCTAT TTCCCTCGCC TTTCCGGTGT TTATCTGGAT GCGTCCGCAC
TGGCAGGATA TGTTAAAACT GGAAGCAGCG GCGCAACGAT TTGGCGATGG GCATCTCTAT
GAGCGTATCC ACTTTGATGA GGGTTCGAGC TTTGAACGAC TTGGTATCGC ATTTAACCAG
ATGGCGGACA ATATCAACGC CTTGATTGCC AGCAAAAAAC AGCTTATTGA CGGTATCGCT
CACGAACTGC GAACACCGTT AGTGCGCCTG TGTTATCGAC TGGAGATGAG CGATAACCTG
AGCGCCGCCG AGTCCCAGGC GTTGAATCGT GATATCAGTC AACTTGAAGC TTTAATTGAA
GAGCTGCTGA CTTATGCCCG ACTCGATCGC CCACAAAACG AGCTTCATCT TAGCGAACCA
GACCTGCCGT TGTGGCTGTC AACGCATCTG GCAGATATTC AGGCAGTAAC GCCCGATAAA
ACGGTACGGA TAAAAACGCT CGTGCAAGGC CATTATGCGG CGTTGGATAT GCGCTTAATG
GAGCGCGTGC TGGATAATTT GCTCAATAAC GCCCTGCGGT ACTGCCATTC AACGGTTGAA
ACCAGCCTGC TACTGTCGGG GAATAGAGCG ACATTAATTG TTGAGGATGA TGGCCCAGGG
ATTGCCCCAG AAAACCGCGA ACATATCTTT GAACCTTTTG TTCGCCTCGA TCCCAGCCGG
GATCGCTCAA CCGGCGGCTG CGGGCTGGGG CTGGCAATTG TCCACTCTAT AGCACTGGCA
ATGGGCGGTA CGGTTAATTG TGACACCAGC GAACTGGGTG GTGCTCGCTT CTCGTTTAGC
TGGCCGTTAT GGCATAACAT CCCGCAATTT ACCTCTGCCT GA
|
|---|
| Protein sequence | MKKLFIQFYL LLFVCFLVMS LLVGLVYKFT AERAGKQSLD DLMNSLLYLM RSELREIPPH
DWGKTLKEMD LNLSFDLRVE PLSKYHLDDI SMHRLRGGEI VALDDQYTFL QRIPRSHYVL
AVGPVPYLYY LHQMRLLDIA LIAFIAISLA FPVFIWMRPH WQDMLKLEAA AQRFGDGHLY
ERIHFDEGSS FERLGIAFNQ MADNINALIA SKKQLIDGIA HELRTPLVRL CYRLEMSDNL
SAAESQALNR DISQLEALIE ELLTYARLDR PQNELHLSEP DLPLWLSTHL ADIQAVTPDK
TVRIKTLVQG HYAALDMRLM ERVLDNLLNN ALRYCHSTVE TSLLLSGNRA TLIVEDDGPG
IAPENREHIF EPFVRLDPSR DRSTGGCGLG LAIVHSIALA MGGTVNCDTS ELGGARFSFS
WPLWHNIPQF TSA
|
|---|
| |