Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1791 |
Symbol | arcD |
ID | 6269974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1635644 |
End bp | 1637026 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641725861 |
Product | arginine/ornithine antiporter |
Protein accession | YP_001880359 |
Protein GI | 187733695 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0468427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA AACTGGGACT GAGCGCACTC ACCGCGCTGG TATTAAGCTC AATGCTGGGC GCGGGTGTTT TCAGTCTGCC GCAAAATATG GCGGCAGTTG CCAGCCCGGC AGCACTGCTC ATCGGCTGGG GTATTACTGG CGCTGGCATT TTATTGCTGG CCTTTGCCAT GCTGATCCTC ACGCGCATTC GTCCCGAACT TGACGGCGGT ATCTTTACCT ATGCCCGCGA AGGGTTTGGC GAGCTAATCG GCTTTTGTTC CGCATGGGGA TACTGGCTGT GCGCAGTCAT CGCCAACGTC TCCTATCTGG TGATCGTTTT TTCCGCGTTA AGCTTTTTTA CGGACACGCC GGAATTGCGC CTGTTCGGCG ATGGTAATAC CTGGCAATCG ATCGTCGGTG CATCGGCTTT ATTGTGGATT GTTCACTTTT TGATCCTGCG CGGGGTGCAA ACCGCTGCCA GCATTAACCT GGTGGCGACA CTGGCAAAAT TGTTGCCGCT GGGTCTGTTT GTTGTGCTGG CGATGATGAT GTTCAAACTG GATACCTTCA AGCTCGACTT CACCGGACTT GTACTTGGCG TACCCGTTTG GGAACAGGTG AAAAACACCA TGCTGATCAC CCTGTGGGTT TTCATTGGTG TGGAAGGTGC CGTGGTTGTT TCTGCGCGTG CGCGTAATAA ACGTGATGTT GGCAAAGCGA CACTGCTGGC GGTTCTCTCC GCTCTGGGCG TTTACTTGCT GGTAACGCTG CTTTCGCTGG GTGTGGTGGC ACGTCCTGAA CTGGCTGAAA TTCGTAACCC GTCAATGGCC GGTCTGATGG TGGAAATGAT GGGACCATGG GGCGAAATCA TCATCGCTGC CAGTTTGATC GTTTCCGTTT GCGGCGCGTA CTTAAGCTGG ACCATCATGG CGGCAGAAGT TCCGTTCCTG GCTGCCACTC ATAAAGCATT CCCACGCATT TTTGCGCGCC AGAACGCACA AGCTGCGCCA TCCGCCTCAC TGTGGTTGAC CAACATCTGC GTGCAAATTT GTCTGGTACT CATCTGGCTG ACCGGTTCCG ATTACAACAC GTTGCTGACC ATCGCCTCAG AAATGATTCT GGTGCCCTAT TTCCTGGTCG GCGCGTTCTT GCTGAAAATC GCAACCCGTC CACTGCATAA AGCGGTAGGT GTCGGTGCCT GCATTTATGG CTTATGGTTA TTGTACGCCT CTGGTCCAAT GCACTTGCTG TTATCCGTTG TTCTGTATGC GCCGGGGCTG CTGGTTTTCC TGTATGCGCG CAAAACGCAT ACACATGATA ATGTACTGAA CCGTCAGGAA ATGGTGCTGA TTGGCATGCT GTTAATTGCC TCAGTTCCGG CGACCTGGAT GCTGGTGGGA TAA
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Protein sequence | MEKKLGLSAL TALVLSSMLG AGVFSLPQNM AAVASPAALL IGWGITGAGI LLLAFAMLIL TRIRPELDGG IFTYAREGFG ELIGFCSAWG YWLCAVIANV SYLVIVFSAL SFFTDTPELR LFGDGNTWQS IVGASALLWI VHFLILRGVQ TAASINLVAT LAKLLPLGLF VVLAMMMFKL DTFKLDFTGL VLGVPVWEQV KNTMLITLWV FIGVEGAVVV SARARNKRDV GKATLLAVLS ALGVYLLVTL LSLGVVARPE LAEIRNPSMA GLMVEMMGPW GEIIIAASLI VSVCGAYLSW TIMAAEVPFL AATHKAFPRI FARQNAQAAP SASLWLTNIC VQICLVLIWL TGSDYNTLLT IASEMILVPY FLVGAFLLKI ATRPLHKAVG VGACIYGLWL LYASGPMHLL LSVVLYAPGL LVFLYARKTH THDNVLNRQE MVLIGMLLIA SVPATWMLVG
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