| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1787 |
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| Symbol | tqsA |
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| ID | 6269409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1630000 |
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| End bp | 1631034 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641725857 |
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| Product | putative transport protein |
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| Protein accession | YP_001880355 |
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| Protein GI | 187731327 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.619529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGC CGATCATCAC GCTCAATGGC CTAAAAATCG TCATTATGTT GGGAATGCTG
GTCATTATTC TCTGCGGTAT CCGTTTTGCC GCCGAGATCA TCGTGCCGTT TATTCTCGCA
TTATTTATTG CTGTTATTCT TAACCCGCTG GTGCAACACA TGGTCCGCTG GCGAGTGCCG
CGTGTACTGG CGGTGTCGAT TTTGATGACC ATCATCGTGA TGGCGATGGT GTTGCTATTA
GCTTATCTGG GTTCCGCGCT CAACGAGTTG ACGCGGACGT TACCGCAATA TCGCAACTCT
ATTATGACGC CGCTGCAAGC TCTTGAGCCG TTGTTGCAAC GCGTAGGGAT TGACGTCTCA
GTTGACCAGC TGGCGCATTA CATTGATCCG AACGCAGCGA TGACGTTGCT CACCAACTTA
TTGACGCAGT TATCTAATGC CATGTCATCA ATATTTTTAT TGCTGCTGAC GGTGCTGTTT
ATGCTGCTCG AAGTGCCACA ATTGCCCGGA AAATTTCAGC AAATGATGGC GCGTCCGGTT
GAAGGGATGG CGGCGATTCA ACGTGCAATT GACAGTGTTT CTCATTATCT GGTGCTGAAA
ACAGCCATCA GCATCATCAC CGGCCTGGTC GCCTGGGCGA TGCTCGCCGC ACTCGATGTT
CGCTTCGCTT TTGTCTGGGG ATTGCTGGCC TTTGCGCTTA ATTACATCCC TAATATTGGT
TCAGTTCTCG CGGCAATCCC CCCTATCGCT CAGGTACTGG TGTTTAATGG CTTCTACGAA
GCGTTGCTGG TGCTGGCGGG ATATCTGCTG ATTAATCTGG TCTTCGGCAA TATTCTGGAG
CCGCGCATCA TGGGACGTGG GCTGGGGCTT TCCACATTGG TGGTATTTTT GTCGTTGATT
TTTTGGGGAT GGTTGTTAGG ACCGGTGGGT ATGCTGCTTT CCGTGCCGTT AACAATTATT
GTCAAAATTG CGCTTGAACA AACAGCGGGA GGTCAAAGCA TCGCCGTTCT GTTAAGCGAT
CTCAATAAAG AGTGA
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| Protein sequence | MAKPIITLNG LKIVIMLGML VIILCGIRFA AEIIVPFILA LFIAVILNPL VQHMVRWRVP
RVLAVSILMT IIVMAMVLLL AYLGSALNEL TRTLPQYRNS IMTPLQALEP LLQRVGIDVS
VDQLAHYIDP NAAMTLLTNL LTQLSNAMSS IFLLLLTVLF MLLEVPQLPG KFQQMMARPV
EGMAAIQRAI DSVSHYLVLK TAISIITGLV AWAMLAALDV RFAFVWGLLA FALNYIPNIG
SVLAAIPPIA QVLVFNGFYE ALLVLAGYLL INLVFGNILE PRIMGRGLGL STLVVFLSLI
FWGWLLGPVG MLLSVPLTII VKIALEQTAG GQSIAVLLSD LNKE
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