| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1759 |
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| Symbol | |
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| ID | 6270404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1599430 |
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| End bp | 1601802 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641725833 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001880331 |
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| Protein GI | 187733928 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.949304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAG TTCTTATTCC TGGCGTCATT TTATGTGGCG CTGATGTGGC GCAGGCCGTC
GATGACAAAA ACATGTACAT GCATTTTTTT GAAGAGATGA CGGTCTATGC TCCTGTCCCT
GTACCCGTAA ACGGCAACAC GCATTACACC AGTGAAAGCA TCGAGCGTTT ACCGACCGGG
AATGGCAATA TCAGCGATCT GCTGAGAACC AACCCTGCGG TACGCATGGA TTCAACGCAA
AGTACCTCGT TGAACCAGGG AGATATTCGC CCTGAGAAAA TCTCTATTCA CGGTGCGTCG
CCCTACCAGA ATGCCTATTT GATTGACGGT ATTAGTGCAA CTAATAACCT GAACCCAGCG
AATGAGTCCG ATGCCAGTAG TGCAACCAAT ATTAGCGGGA TGTCACAGGG GTATTATCTT
GATGTCAGCT TACTGGACAA TGTGACGCTT TATGACAGTT TTGTGCCGGT TGAATTTGGT
CGCTTCAATG GCGGGGTAAT TGATGCAAAG ATCAAACGCT TCAACGCTGA TGATAGCAAG
GTGAAATTGG GTTATCGCAC TACGCGTTCG GACTGGTTAA CATCGCATAT CGATGAGAAT
AACAAGAGCG CATTTAATCA AGGTTCTTCA GGAAGTACTT ATTTCTCTCC AGATTTTAAA
AAGAACTTTT ATACCTTGTC GTTTAATCAG GAGCTGGCTG ATAACTTTGG CGTTACCGCC
GGTTTATCGC GCCGCCAGTC TGATATCACC CGCGCGGATT ATGTTTCGAA TGACGGCATT
GTCGCCGGTC GGGCACAGTA TAAAAACGTT ATCGATACTG CATTGAGCAA ATTTACCTGG
TTTGCCAGCG ACCGCTTTAC CCACGATTTA ACCTTAAAAT ATACCGGCTC CAGCCGTGAT
TATAATACCA GCACCTTCCC GCAGTCTGAT CGCGAAATGG GTAATAAATC CTATGGTCTT
GCATGGGATA TGGATACGCA ACTCGCATGG GCCAAACTAC GTACCACCGT TGGTTGGGAT
CATATTAGTG ATTATACCCG TCACGATCAT GACATCTGGT ACACCGAACT TTCATGTACA
TATGGTGATA TTACAGGGCG TTGTACCCGT GGCGGATTAG GACACATTTC CCAGGCTGTA
GATAATTACA CCTTCAAAAC ACGCCTGGAC TGGCAAAAAT TCGCCGTGGG TGATGTTTCG
CATCAACCCT ACTCCGGCGC GGAATACATC TATTCCGATG CATGGACTGA ACGCCATAAC
CAGTCTGAAT CCTATGTGAT TAATGCTGCA GGAAAGAAAA CTAACCATAC CATTTACCAT
AAAGGTAAAG GCAGCCTAGG AATTGACAAC TACACGCTGT ATATGGCGGA TCACATTAGC
TGGAGGAATG TGTCGTTAAT GCCCGGTGTG CGTTATGACT ATGACAACTA TCTGTCAAAC
CACAATATCT CCCCGCGCTT TATGACGGAA TGGGATATTT TTGCTGATCA AACCTCAATG
ATTACCGCCG GTTATAACCG TTACTATGGC GGGAATATTC TTGATATGGG ATTACGTGAT
ATCCGCAATA GCTGGACGGA ATCGGTATCA GGTAATAAAA CCCTGACGCG TTATCAGAAT
TTGAAAACGC CTTATAACGA TGAACTGGCA ATGGGATTGC AGCAAAAAAT CGGTAAGAAC
GTTATTGCAC GCGCAAACTA TGTTTACCGT GCAGCGCATG ATCAAATCAG CAAAAGCAGT
CGTACCGACA GCGCGACTAA AACCACCATT ACTGAATATA ACAACGATGG CAAAACCAAA
ACGCATTCGT TTAACCTCAG TTTTGAACTG GCCGAACCCC TGCATATCCG CCAGGTAGAT
ATTAACCCGC AAATTGTCTT TAGCTATATC AAGAGCAAGG GCAACTTGTC GTTAAACAAT
GGTTATGAGG AGAGCAATAC CGGTGATAAC CAGGTGGTTT ATAACGGTAA TCTGGTCTCT
TACGATAGCG TTCCAGTGGC AGATTTTAAT AACCCATTAA AGATCTCCTT AAACATGGAT
TTCACGCATC AACCGAGCGG GTTAGTGTGG GCGAATACGC TGGCCTGGCA AGAAGCGCGT
AAAGCTCGCA TTATCCTTGG TAAGACAAAT GCGCAATACA TCAGCGAATA TTCAGATTAC
AAGCAGTATG TTGACGAAAA ACTGGATAGC AGCCTGACCT GGGACACCCG CTTGTCCTGG
ACGCCACAAT TTCTGAAACA ACAAAACCTG ACGATCAGTG CCGATATTCT CAATGTACTG
GATAGCAAAA CCGCTGTTGA TACAACGAAT ACCGGTGTGG CGACCTACGC CAGTGGCCGT
ACTTTCTGGC TTGATGTCAG CATGAAATTT TAA
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| Protein sequence | MKRVLIPGVI LCGADVAQAV DDKNMYMHFF EEMTVYAPVP VPVNGNTHYT SESIERLPTG
NGNISDLLRT NPAVRMDSTQ STSLNQGDIR PEKISIHGAS PYQNAYLIDG ISATNNLNPA
NESDASSATN ISGMSQGYYL DVSLLDNVTL YDSFVPVEFG RFNGGVIDAK IKRFNADDSK
VKLGYRTTRS DWLTSHIDEN NKSAFNQGSS GSTYFSPDFK KNFYTLSFNQ ELADNFGVTA
GLSRRQSDIT RADYVSNDGI VAGRAQYKNV IDTALSKFTW FASDRFTHDL TLKYTGSSRD
YNTSTFPQSD REMGNKSYGL AWDMDTQLAW AKLRTTVGWD HISDYTRHDH DIWYTELSCT
YGDITGRCTR GGLGHISQAV DNYTFKTRLD WQKFAVGDVS HQPYSGAEYI YSDAWTERHN
QSESYVINAA GKKTNHTIYH KGKGSLGIDN YTLYMADHIS WRNVSLMPGV RYDYDNYLSN
HNISPRFMTE WDIFADQTSM ITAGYNRYYG GNILDMGLRD IRNSWTESVS GNKTLTRYQN
LKTPYNDELA MGLQQKIGKN VIARANYVYR AAHDQISKSS RTDSATKTTI TEYNNDGKTK
THSFNLSFEL AEPLHIRQVD INPQIVFSYI KSKGNLSLNN GYEESNTGDN QVVYNGNLVS
YDSVPVADFN NPLKISLNMD FTHQPSGLVW ANTLAWQEAR KARIILGKTN AQYISEYSDY
KQYVDEKLDS SLTWDTRLSW TPQFLKQQNL TISADILNVL DSKTAVDTTN TGVATYASGR
TFWLDVSMKF
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