| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1758 |
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| Symbol | pqqL |
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| ID | 6270921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1596590 |
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| End bp | 1599373 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641725832 |
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| Product | peptidase, M16B family |
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| Protein accession | YP_001880330 |
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| Protein GI | 187730507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0324613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAACC TCTGTTTCTT ACTGACGTTA GTGGCAACTC TGTTGCTCCC CGGGCGGCTG
ATTGCCGCCG CCTTACCGCA GGATGAAAAG TTAATTACCG GGCAACTGGA CAATGGCTTG
CGATATATGA TTTATCCGCA TGCTCAACCA AAGGATCAGG TAAATTTATG GCTGCAAATT
CATACCGGTT CATTGCAGGA AGAAGACAAT GAGCGCGGCG TGGCTCATTT TGTAGAACAT
ATGATGTTTA ACGGCACAAA AACATGGCCG GGTAATAAAG TCATCGAAAC ATTTGAGTCA
ATGGGCCTGC GTTTTGGTCG CGATGTTAAT GCCTATACCA GCTATGACGA AACGGTGTAT
CAGGTGAGTT TGCCGACTAC GCAGAAACAA AATCTGCAAC AAGTGATGGC AATCTTCAGT
GAATGGAGTA ATGCCGCAAC CTTTGAAAAA CTCGAAGTAG ACGCTGAACG TGGCGTAATT
ACTGAGGAAT GGCGTGCCCA TCAGGATGCG AAATGGCGCA CCTCTCAGGC GCGCCGCCCT
TTCCTGCTGG CTAATACCCG TAATTTAGAC CGTGAACCTA TCGGCCTGAT GGATACTGTC
GCCACGGTCA CACCGGCACA ATTGCGCCAA TTTTATCAAC GCTGGTATCA ACCAAATAAT
ATGACCTTTA TCGTGGTCGG CGATATCGAC AGTAAAGAAG CGCTGGCGCT GATAAAGGAT
AATTTAAGTA AGCTTCCGGC TAACAAAGCA GCTGAAAATC GCGTCTGGCC GACAAAAGCC
GAAAACCACC TGCGCTTTAA TATCATTAAT GATAAAGAAA ACCGGGTGAA CGGCATCGCA
CTCTATTATC GCCTGCCAAT GGTACAAGTG AACGATGAGC AAAGCTTTAT CGAACAAGCT
GAATGGAGCA TGTTAGTTCA GCTGTTCAGT CAACGTCTGC AGGAACGCAT ACAGTCGGGC
GAGTTGAAGA CTATTTCTGG CGGCACTGCG CGCAGCGTTA AAATTGCACC CGATTATCAG
TCGCTGTTTT TCCGTGTAAA TGCACGAGAC GATAATATGC AGGATGCTGC GAATGCATTA
ATGTCAGAGT TGGCAACCAT TGATCAGCAT GGTTTTTCTG CTGAAGAACT CGATGATGTC
AAATCTACCC GCCTCACCTG GCTGAAAAAT GCGGTTGATC AGCAAGCTGA ACGTGATTTA
CGTATGCTGA CCAGTCGCCT GGCATCCAGC TCATTAAATA ATACGCCGTT CTTGTCGCCG
GAAGAGACAT ATCAACTTTC GAAACGTCTG TGGCAGCAAA TTACCGTGCA AAGTCTGGCG
GAAAAATGGC AGCAGTTAAG AAAGAACCAG GACGCATTTT GGGAGCAAAT GGTAAACAAT
GAGCTTGCCG CCAAAAAAGC ATTGTCTCCT GCGGCTATCC TGGCGCTGGA AAAAGAGTAC
GCCAACAAAA AGCTGGCGGC TTACATCTTC CCAGGCAGAA ATTTATCGTT AACAGTAGAC
GCTGACCCAC AGGCGGAAAT TAGCAGCAAA GAAACGCTGG CTGAGAATCT GACATCATTA
ACACTTTCCA ATGGTGCCAG GGTTATTCTG GCAAAATCCG CGGGTGAAGA GCAAAAGCTA
CAAATTACTG CCGTATCGAA TAAAGGCGAT TTAAGTTTCC CTGCGCAGCA AAAATCACTT
ATCGCGCTGG CAAATAAAGC AGTAAGCGGA AGCGGCGTTG GTGAGCTCTC CTCTTCCAGC
CTGAAACGCT GGAGTGCGGA AAATTCGGTA ACCATGAGCA GTAAAGTCAG TGGCATGAAT
ACGTTGCTCT CCGTTAGCGC GCGGACTAAT AACCCTGAAC CTGGTTTTCA GTTGATTAAC
CAGCGAATCA CCCACAGCAC GATTAACGAC AATATTTGGG CATCGCTACA AAATGCTCAA
ATTCAGGCGT TGAAAACGCT CGACCAGCGT CCAGCGGAGA AATTCGCCCA GCAGATGTAT
GAGACGCGCT ATGCTGATGA CCGCACGAAA TTACTGCAAG AAAATCAGAT TGTACAGTTT
ACTGCCGCAG ATGCGCTGGC TGCCGATCGC CAGTTGTTTT CATCTCCAGC GGATATCACG
TTTGTCATTG TCGGTAATGT CTCAGAAGAC AAACTCGTGG CGTTAATTAC GCGTTACTTA
GGATCAATCA AACACTCTGA TTCGCCATTA GCCGCAGGTA AACCATTAAC TCGCGCGACG
GACAACGCAT CGGTTACTGT AAAAGAACAA AATGAACCTG TGGCACAGGT TTCACAGTGG
AAGCGTTATG ATTCCCGGAC ACCTGTTAAT CTGGCGACGC GTATGGCGCT CGATGCTTTT
AACGTCGCAC TGGCAAAAGA TCTACGTGTT AATATTCGTG AACAGGCATC TGGAGCATAC
AGCGTTTCTT CTCGCCTCTC GGTTGATCCT CAGGCCAAAG ATATCAGTCA TTTGCTGGCT
TTTACTTGTC AACCAGAACG ACATGATGAA CTGTTAACGT TAGCGAATGA AGTGATGGTT
AAGCGTCTGG CTAAAGGGAT CAGTGAGCAA GAACTGAATG AATACCAGCA AAACGTTCAG
CGCAGCCTCG ATATCCAACA GCGTAGCGTT CAACAATTAG CGAACACTAT TGTAAATAGT
CTTATTCAAT ATGACGATCC TGCAGCATGG ACTGAGCAGG AGCAATTGTT GAAACAAATG
ACGGTAGAGA ATGTTAACAC TGCCGTTAAA CAATATCTTT CTCATCCGGT AAATACTTAT
ACCGGAGTAT TATTGCCAAA ATAA
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| Protein sequence | MRNLCFLLTL VATLLLPGRL IAAALPQDEK LITGQLDNGL RYMIYPHAQP KDQVNLWLQI
HTGSLQEEDN ERGVAHFVEH MMFNGTKTWP GNKVIETFES MGLRFGRDVN AYTSYDETVY
QVSLPTTQKQ NLQQVMAIFS EWSNAATFEK LEVDAERGVI TEEWRAHQDA KWRTSQARRP
FLLANTRNLD REPIGLMDTV ATVTPAQLRQ FYQRWYQPNN MTFIVVGDID SKEALALIKD
NLSKLPANKA AENRVWPTKA ENHLRFNIIN DKENRVNGIA LYYRLPMVQV NDEQSFIEQA
EWSMLVQLFS QRLQERIQSG ELKTISGGTA RSVKIAPDYQ SLFFRVNARD DNMQDAANAL
MSELATIDQH GFSAEELDDV KSTRLTWLKN AVDQQAERDL RMLTSRLASS SLNNTPFLSP
EETYQLSKRL WQQITVQSLA EKWQQLRKNQ DAFWEQMVNN ELAAKKALSP AAILALEKEY
ANKKLAAYIF PGRNLSLTVD ADPQAEISSK ETLAENLTSL TLSNGARVIL AKSAGEEQKL
QITAVSNKGD LSFPAQQKSL IALANKAVSG SGVGELSSSS LKRWSAENSV TMSSKVSGMN
TLLSVSARTN NPEPGFQLIN QRITHSTIND NIWASLQNAQ IQALKTLDQR PAEKFAQQMY
ETRYADDRTK LLQENQIVQF TAADALAADR QLFSSPADIT FVIVGNVSED KLVALITRYL
GSIKHSDSPL AAGKPLTRAT DNASVTVKEQ NEPVAQVSQW KRYDSRTPVN LATRMALDAF
NVALAKDLRV NIREQASGAY SVSSRLSVDP QAKDISHLLA FTCQPERHDE LLTLANEVMV
KRLAKGISEQ ELNEYQQNVQ RSLDIQQRSV QQLANTIVNS LIQYDDPAAW TEQEQLLKQM
TVENVNTAVK QYLSHPVNTY TGVLLPK
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