| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1752 |
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| Symbol | dos |
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| ID | 6269490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1587510 |
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| End bp | 1589933 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641725827 |
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| Product | cAMP phosphodiesterase |
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| Protein accession | YP_001880325 |
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| Protein GI | 187730158 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAGG ATGCAGAGGT AATCATGAAG CTAACCGATG CGGAAAATGC CGCCGATGGC
ATTTTTTTCC CCGCCCTTGA ACAAAATATG ATGGGCGCGG TGTTAATTAA CGAAAATGAT
GAAGTGATGT TTTTCAACCC CGCCGCAGAG AAGCTCTGGG GGTACAAACG TGAAGAAGTC
ATTGGCAATA ACATTGATAT GCTGATTCCG CGGGATTTGC GTCCTGCACA TCCTGAATAC
ATTCGTCATA ACCGTGAAGG TGGTAAAGCG CGCGTCGAGG GGATGAGTCG GGAGCTGCAG
CTGGAGAAAA AAGACGGCAG TAAAATCTGG ACCCGTTTTG CGCTATCGAA AGTGAGCGCC
GAGGGGAAAG TTTATTACCT GGCGCTGGTA CGGGATGCCA GCGTAGAAAT GGCGCAAAAA
GAACAGACCC GACAATTGAT TATTGCCGTT GACCATCTCG ACCGACCGGT GATTGTCCTC
GATCCGGAAC GCCATATTGT GCAGTGCAAT CGCGCATTTA CCGAAATGTT TGGTTACTGC
ATTAGCGAAG CCTGCGGTAT GCAGCCCGAT ACACTCCTGA ACATTCCTGA ATTCCCTGCC
GATAACCGCA TTCGTTTACA ACAGTTGCTA TGGAAAACCG CCCGCGATCA GGACGAATTT
CTGCTGTTGA CGCGCACCGG TGAAAAAATC TGGATTAAAG CCTCTATCAG CCCGGTTTAT
GACGTGCTCG CGCATCTGCA GAACCTGGTA ATGACTTTCT CGGATATCAC CGAAGAACGG
CAAATCCGCC AGCTTGAAGG CAATATTCTC GCCGCCATGT GCAGCAGCCC GCCATTTCAT
GAAATGGGGG AAATCATTTG TCGTAACATC GAATCTGTTC TCAACGAATC GCATGTTTCG
CTGTTCGCAC TGCGCAACGG GATGCCGATA CACTGGGCGT CATCTTCGCA CGGTGCAGAA
GTTCAAAATG CGCAAAGCTG GTCAGCGACC ATTCGTCAGC GTGATGGCGC GCCTGCGGGG
ATCCTGCAAA TTAAAACCTC GTCAGGAGCA GAAACCAGCG CCTTTATCGA ACGCGTGGCA
GATATCAGTC AGCATATGGC CGCGCTGGCG CTGGAACAGG AAAAAAGCCG CCAGCATATT
GAACAACTCA TCCAATTTGA TCCGATGACC GGTCTGCCAA ATCGCAATAA CCTGCACAAT
TACCTCGATG ACCTGGTCGA CAAAGCCGTC TCTCCGGTGG TGTATCTCAT CGGTGTTGAC
CATATTCAGG ATGTGATTGA TAGCCTTGGC TATGCGTGGG CCGATCAGGC ATTGCTGGAA
GTGGTCAATC GCTTTCGTGG AAAACTCAAA CCGGATCAGT ATCTCTGTCG TATCGAAGGT
ACGCAGTTTG TCCTCGTGAG CCTGGAAAAC GACGTCAGTA ACATTACCCA GATCGCCGAT
GAGCTACGGA ATGTGGTCAG CAAGCCGATA ATGATTGACG ATAAACCATT CCCGCTTACC
TTGAGTATTG GCATCAGCTA CGACGTGGGT AAAAACCGCG ATTACCTACT CTCCACTGCT
CACAATGCAA TAGATTATAT TCGCAAGAAT GGCGGTAACG GCTGGCAGTT CTTCAGCCCG
GCGATGAACG AAATGGTAAA AGAGCGTTTG GTTTTAGGCG CAGCGCTGAA AGAAGCGATT
AGCAATAACC AACTGAAACT TGTTTACCAG CCGCAAATCT TCGCAGAAAC GGGTGAACTG
TACGGCATCG AAGCCCTTGC GCGCTGGCAC GATCCCCAGC ATGGTCATGT GCCCCCTTCA
CGGTTTATTC CTCTCGCAGA AGAGATTGGT GAAATCGAAA ATATTGGGCG CTGGGTCATC
GCGGAAGCTT GCCGTCAGTT AGCAGAATGG CGTAGCCAGA ATATTCATAT CCCGGCGCTT
TCCGTTAACT TGTCGGCACT GCACTTTCGC AGTAATCAAC TGCCTAATCA GGTGTCTGAT
GCAATGCACG CCTGGGGTAT TGACGGCCAC CAGCTGACGG TAGAAATCAC GGAAAGCATG
ATGATGGAAC ACGATACCGA AATCTTTAAG CGCATTCAGA TCCTGCGTGA TATGGGCGTG
GGCTTATCGG TAGATGATTT TGGTACGGGC TTTTCCGGAT TATCCCGCTT AGTCAGTCTT
CCGGTAACGG AAATCAAAAT TGACAAAAGT TTTGTCGATC GTTGTCTGAC CGAAAAACGC
ATCCTTGCCT TACTTGAAGC CATTACCAGC ATTGGGCAAA GCCTCAATTT AACCGTCGTG
GCGGAAGGCG TCGAAACCAA AGAGCAATTT GAGATGCTAC GCAAGATCCA CTGTCGCGTT
ATTCAGGGAT ATTTCTTTTC CCGCCCCCTA CCCGCCGAAG AAATTCCAGG CTGGATGAGC
AGCGTGTTAC CGCTGAAAAT CTGA
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| Protein sequence | MRQDAEVIMK LTDAENAADG IFFPALEQNM MGAVLINEND EVMFFNPAAE KLWGYKREEV
IGNNIDMLIP RDLRPAHPEY IRHNREGGKA RVEGMSRELQ LEKKDGSKIW TRFALSKVSA
EGKVYYLALV RDASVEMAQK EQTRQLIIAV DHLDRPVIVL DPERHIVQCN RAFTEMFGYC
ISEACGMQPD TLLNIPEFPA DNRIRLQQLL WKTARDQDEF LLLTRTGEKI WIKASISPVY
DVLAHLQNLV MTFSDITEER QIRQLEGNIL AAMCSSPPFH EMGEIICRNI ESVLNESHVS
LFALRNGMPI HWASSSHGAE VQNAQSWSAT IRQRDGAPAG ILQIKTSSGA ETSAFIERVA
DISQHMAALA LEQEKSRQHI EQLIQFDPMT GLPNRNNLHN YLDDLVDKAV SPVVYLIGVD
HIQDVIDSLG YAWADQALLE VVNRFRGKLK PDQYLCRIEG TQFVLVSLEN DVSNITQIAD
ELRNVVSKPI MIDDKPFPLT LSIGISYDVG KNRDYLLSTA HNAIDYIRKN GGNGWQFFSP
AMNEMVKERL VLGAALKEAI SNNQLKLVYQ PQIFAETGEL YGIEALARWH DPQHGHVPPS
RFIPLAEEIG EIENIGRWVI AEACRQLAEW RSQNIHIPAL SVNLSALHFR SNQLPNQVSD
AMHAWGIDGH QLTVEITESM MMEHDTEIFK RIQILRDMGV GLSVDDFGTG FSGLSRLVSL
PVTEIKIDKS FVDRCLTEKR ILALLEAITS IGQSLNLTVV AEGVETKEQF EMLRKIHCRV
IQGYFFSRPL PAEEIPGWMS SVLPLKI
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