Gene SbBS512_E1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1750 
Symbol 
ID6271627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1585107 
End bp1586657 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content51% 
IMG OID641725825 
Productputative ABC transporter periplasmic-binding protein yddS precursor 
Protein accessionYP_001880323 
Protein GI187730477 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.843018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAT CGATACCGTT TCGTCCTACA TTGCTCGCGC TCGTCCTTGC CACAACTTTC 
CCGGTTGCGC ACGCCGCCGT ACCGAAAGAT ATGCTGGTGA TTGGTAAGGC CGCCGATCCA
CAAACCCTCG CCCCGGCGGT AACAATAGAT AATAACGACT GGACGGTGAC CTACCCGTCT
TATCAGCGGC TGGTTCAGTA CAAAACGGAC GGTGATAAAG GCTCAACCGA CGTTGAAGGC
GATCTGGCAA GTAGCTGGAA AGCGTCTGAC GATCAAAAAG AGTGGACGTT CACCCTGAAG
GACAATGCTA AATTTGCCGA TGGCACACCG GTCACTGCCG AAGCAGTAAA ACTCTCTTTT
GAGCGGCTAC TAAAAATCGG CCAGGGGCCA GCAGAAGCAT TTCCCAAAGA TTTAAAGATT
GATGCTCCCG ACGAACATAC GGTGAAGTTT ACCCTTAGCC AGCCATTCGC ACCGTTCCTC
TACACGCTGG CGAATGACGG TGCATCCATT ATCAATCCGG CGGTGTTAAA GGAACATGCA
GCGGATGATG CCCGCGGCTT CCTCGCGCAA AATACCGCCG GTTCCGGACC ATTTATGCTG
AAAAGCTGGC AAAAAGGTCA GCAATTAGTT CTGGTGCCAA ATCCGCATTA CCCTGGCAAT
AAACCGAACT TTAAGCGAGT ATCGGTAAAA ATTATTGGTG AAAGTGCCTC CCGTCGCCTG
CAGCTCTCCC GTGGTGATAT TGACATTGCC GATGCGCTGC CGGTGGATCA ACTCAACGCC
CTGAAGCAGG AAAACAAAGT CAATGTGGCA GAGTATCCGT CACTGCGCGT CACCTACCTG
TATCTGAATA ACAGCAAAGC GCCTCTTAAT CAGGCGGATC TGCGTCGGGC CATTTCCTGG
TCTACCGATT ATCAGGGCAT GGTTAACGGC ATTCTGAGTG GTAACGGAAA ACAGATGCGC
GGCCCGATTC CGGAAGGCAT GTGGGGCTAC GATGCGACGG CAATGCAATA CAACCATGAC
GAAACGAAAG CCAAAGCCGA ATGGGATAAA GTGACGAGCA AACCCACCAG CCTGACGTTT
CTCTACTCCG ATAAGGATCC GAACTGGGAG CCTATTGCTC TGGCGACACA ATCCAGTCTC
AACAAGCTGG ACATCAATGT GAAGCTGGAA AAACTGGCGA ACGCCACCAT GCGCGACAGA
GTGGGTAAAG GTGATTACGA CATTGCGATT GGCAACTGGA GTCCAGATTT TGCCGACCCG
TATATGTTTA TGAATTACTG GTTTGAGTCA GACAAAAAAG GTCTGCCGGG TAACCGCTCG
TTCTATGAAA ACAGTGAGGT CGATAAGTTA CTGCGCAATG CGCTTGCGAC CACCGACCAG
ACGCAGCGTA CCCGGGACTA CCAGCAGGCA CAGAAAATCG TCATTGATGA CGCTGCTTAT
GTGTACCTGT TCCAGAAAAA CTACCAACTG GCGATGAACA AAGAGGTGAA AGGCTTTGTG
TTCAATCCCA TGCTGGAACA GGTCTTCAAT ATCAATACCA TGAGTAAATA A
 
Protein sequence
MKRSIPFRPT LLALVLATTF PVAHAAVPKD MLVIGKAADP QTLAPAVTID NNDWTVTYPS 
YQRLVQYKTD GDKGSTDVEG DLASSWKASD DQKEWTFTLK DNAKFADGTP VTAEAVKLSF
ERLLKIGQGP AEAFPKDLKI DAPDEHTVKF TLSQPFAPFL YTLANDGASI INPAVLKEHA
ADDARGFLAQ NTAGSGPFML KSWQKGQQLV LVPNPHYPGN KPNFKRVSVK IIGESASRRL
QLSRGDIDIA DALPVDQLNA LKQENKVNVA EYPSLRVTYL YLNNSKAPLN QADLRRAISW
STDYQGMVNG ILSGNGKQMR GPIPEGMWGY DATAMQYNHD ETKAKAEWDK VTSKPTSLTF
LYSDKDPNWE PIALATQSSL NKLDINVKLE KLANATMRDR VGKGDYDIAI GNWSPDFADP
YMFMNYWFES DKKGLPGNRS FYENSEVDKL LRNALATTDQ TQRTRDYQQA QKIVIDDAAY
VYLFQKNYQL AMNKEVKGFV FNPMLEQVFN INTMSK