| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1748 |
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| Symbol | yddQ |
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| ID | 6271971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1583741 |
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| End bp | 1584625 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641725824 |
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| Product | ATP-dependent peptide transporter membrane subunit |
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| Protein accession | YP_001880322 |
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| Protein GI | 187731429 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.161109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCTAA GCGAGGAAAC GTCCGCCGTA CGCCCACAAA AACAAACGCG ATTTAACGGT
GCAAAACTGG TATGGATGCT GAAAGGCAGT CCGCTCACCG TGACCGGCGC AGTCATCATT
GTATTAATGC TATTGATGAT GTTTTTTTCA CCGTGGCTTG CGACGCATGA TCCCAACGCC
ATTGATTTAA CCGCCCGCCT TTTGCCGCCT TCTGCGGCGC ACTGGTTTGG CACCGATGAA
GTGGGACGCG ATCTGTTCAG CCGCGTACTG GTCGGCAGTC AGCAATCAAT TCTCGCCGGA
TTAGTCGTGG TTGCCATTGC GGGTATGATT GGTTCGCTAC TCGGTGTGCT TGGCGGACGC
GCAGACGCCA TCATCATGCG CATCATGGAC ATTATGCTGT CGATTCCTTC GTTGGTACTG
ACAATGGCAC TGGCTGCCGC TCTCGGGCCG AGTTTATTTA ACGCCATGCT GGCGATTGCT
ATTGTGCGAA TTCCCTTTTA TGTGCGCCTG GCGCGGGGGC AAGCATTAGT TGTACGCCAG
TATACCTATG TTCAGGCGGC GAAAACCTTT GGTGCGTCGC GTTGGCATCT GATCAGCTGG
CATATTTTAC GTAACTCCCT GCCGCCGCTG ATCGTGCAGG CATCGCTGGA TATCGGTAGC
GCGATTTTAA TGGCCGCCAC GTTGGGATTT ATTGGCCTGG GTGCTCAACA ACCGAGTGCT
GAATGGGGCG CGATGGTAGC GAATGGTCGC AACTATGTAC TCGATCAGTG GTGGTATTGC
GCATTTCCGG GGGCAGCGAT TTTGCTTACC GCCGTTGGGT TTAATCTCTT TGGTGATGGT
ATTCGCGATC TGCTTGACCC GAAAGCAGGA GGAAAGCAGT CATGA
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| Protein sequence | MMLSEETSAV RPQKQTRFNG AKLVWMLKGS PLTVTGAVII VLMLLMMFFS PWLATHDPNA
IDLTARLLPP SAAHWFGTDE VGRDLFSRVL VGSQQSILAG LVVVAIAGMI GSLLGVLGGR
ADAIIMRIMD IMLSIPSLVL TMALAAALGP SLFNAMLAIA IVRIPFYVRL ARGQALVVRQ
YTYVQAAKTF GASRWHLISW HILRNSLPPL IVQASLDIGS AILMAATLGF IGLGAQQPSA
EWGAMVANGR NYVLDQWWYC AFPGAAILLT AVGFNLFGDG IRDLLDPKAG GKQS
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