Gene SbBS512_E1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1747 
Symbol 
ID6272883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp1582758 
End bp1583744 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content54% 
IMG OID641725823 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_001880321 
Protein GI187731891 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.091986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGC CCGTTCTGGA CATTCAACAG CTGCATTTGA GTTTCCCCGG TTTTAACGGT 
GATGTTCACG CGCTCAACAA TGTGTCCTTG CAGATTAACC GCGGTGAAAT TGTCGGTCTG 
GTGGGAGAAT CCGGCTCAGG TAAATCAGTC ACCGCAATGC TGATTATGCG TCTGCTACCG 
ACGGGCAGTT ATTGCGTACA TCGGGGGCAG ATTTCACTGC TGGGAGACGA TGTTCTTAAC 
GCTCGGGAAA AACAGCTTCG TCAGTGGCGC GGCGCACGAG TGGCGATGAT CTTTCAGGAA 
CCGATGACCG CCCTCAATCC GACACGTCGA ATAGGTCTTC AGATGATGGA CGTGATCCGC 
CATCATCAAC CAATAAGTCG TCGGGAAGCC AGAGCTAAAG CGATTGTCCT GCTGGAAGAG 
ATGCAAATCC CGGATGCCGT GGAAGTTATG TCGCGCTATC CGTTTGAGCT TTCAGGTGGT 
ATGCGCCAGC GGGTAATGAT TGCGCTGGCA TTCTCCTGCG AGCCGCAATT GATTATTGCC 
GACGAACCGA CTACGGCGCT GGACGTCACG GTGCAGTTGC AGGTACTGCG TTTGCTTAAA 
CATAAAGCCC GCGCCAGTGG AACTGCGGTT CTGTTCATCA GCCATGATAT GGCCGTGGTG 
TCGCAACTGT GCGATAGCGT TTACGTGATG TATGCCGGAA GCGTAATTGA AAGCGGCGTG 
AGGGCAGACG TTATCCATCA TCCCCGGCAT CCGTATACCA TTGGTTTGCT CCAATGTGCA 
CCAGAACATG GAGTACCACG CCAGCTATTA CCCGCCATTC CAGGGACGGT ACCAAACCTC 
ACCCATTTGC CTGACGGCTG CGCTTTTCGC GATCGTTGCT ATGCGGCAGG TGCACAGTGT 
GAAAACGTCC CGGCGCTGAC AGCGTGTGGT GACAACAACC AGCGCTGCGC CTGTTGGTAT 
CCGCAGCAGG AGGTCATAAG TGTCTGA
 
Protein sequence
MTQPVLDIQQ LHLSFPGFNG DVHALNNVSL QINRGEIVGL VGESGSGKSV TAMLIMRLLP 
TGSYCVHRGQ ISLLGDDVLN AREKQLRQWR GARVAMIFQE PMTALNPTRR IGLQMMDVIR 
HHQPISRREA RAKAIVLLEE MQIPDAVEVM SRYPFELSGG MRQRVMIALA FSCEPQLIIA 
DEPTTALDVT VQLQVLRLLK HKARASGTAV LFISHDMAVV SQLCDSVYVM YAGSVIESGV 
RADVIHHPRH PYTIGLLQCA PEHGVPRQLL PAIPGTVPNL THLPDGCAFR DRCYAAGAQC 
ENVPALTACG DNNQRCACWY PQQEVISV