Gene SbBS512_E1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1717 
Symbol 
ID6271716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1558497 
End bp1558946 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content52% 
IMG OID641725796 
Producthypothetical protein 
Protein accessionYP_001880294 
Protein GI187731257 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGT CGCTCACCCT TGCTTTTTTG ATTGCCGCCG GAATTGGTCT GGTAGTCCAG 
AACACGCTGA TGGTGCGCAT CACCCAGACC TCCTCTACCA TTCTCATCGC CATGTTGCTG
AACTCACTGG TGGGGATTGT GCTCTTTGTT TCTATTTTAT GGTTTAAACA AGGCATGGCG
GGGTTTGGCG AACTGGTGTC CAGCGTGCGC TGGTGGACAC TTATACCCGG CTTGCTGGGA
TCGTTTTTTG TCTTCGCCAG TATCAGCGGA TATCAGAATG TGGGAGCGGC GACAACTATT
GCAGTACTGG TCGCCAGCCA GCTAATTGGC GGTCTGATGC TGGATATCTT CCGCAGTCAT
GGCGTACCAC TACGGGCGTT GTTCAGCCCA ATTTGTGGCG CAATTTTACT TGTGGTTGGC
GCCTGGTTGG TAGCCAGACG CTCATTTTAA
 
Protein sequence
MNQSLTLAFL IAAGIGLVVQ NTLMVRITQT SSTILIAMLL NSLVGIVLFV SILWFKQGMA 
GFGELVSSVR WWTLIPGLLG SFFVFASISG YQNVGAATTI AVLVASQLIG GLMLDIFRSH
GVPLRALFSP ICGAILLVVG AWLVARRSF