Gene SbBS512_E1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1701 
Symbol 
ID6270410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1547869 
End bp1548615 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content51% 
IMG OID641725781 
Product3-hydroxy acid dehydrogenase 
Protein accessionYP_001880279 
Protein GI187732067 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000649919 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTTT TAGTAACTGG AGCAACGGCA GGTTTTGGTG AATGCATTAC TCGTCGTTTT 
ATTCAACAAG GGCATAAAGT TATCGCCACT GGCCGTCGCC AGGAACGGTT GCAGGTGTTA
AAAGACGAAC TGGGAGATAA TCTGTACATC GCCCAACTGG ACGTTCGCAA CCGCGCCGCT
ATTGAAGAGA TGCTGGCATC GCTTCCTGCC GAGTGGTGCA ATATTGATAT CCTGGTAAAT
AATGCCGGCC TGGCGTTGGG CATGGAGCCT GCGCATAAAG CCAGCGTTGA AGACTGGGAA
ACGATGATTG ATACCAACAA CAAAGGCCTG GTATATATGA CGCGCGCCGT CTTACCGGGT
ATGGTTGAAC GTAATCATGG TCATATTATT AACATTGGCT CAACGGCAGG TAGCTGGCCT
TATGCCGGTG GTAACGTTTA CGGTGCGACG AAAGCGTTTG TTCGTCAGTT TAGCCTGAAT
CTGCGTACGG ACCTGCATGG TACGGCGGTG CGCGTCACCG ACATCGAACC GGGTCTGGTG
GGTGGCACCG AGTTTTCCAA TGTCCGCTTT AAAGGCGATG ACGGTAAAGC GGAAAAAACC
TATCAAAATA CCGTTGCATT GACGCCAGAA GATGTCAGCG AAGCCGTTTG GTGGGTGTCA
ACGCTGCCTG CTCACGTCAA TATCAATACC CTGGAAATGA TGCCGGTTAC CCAAAGCTAT
GCCGGACTGA ATGTCCACCG TCAGTAA
 
Protein sequence
MIVLVTGATA GFGECITRRF IQQGHKVIAT GRRQERLQVL KDELGDNLYI AQLDVRNRAA 
IEEMLASLPA EWCNIDILVN NAGLALGMEP AHKASVEDWE TMIDTNNKGL VYMTRAVLPG
MVERNHGHII NIGSTAGSWP YAGGNVYGAT KAFVRQFSLN LRTDLHGTAV RVTDIEPGLV
GGTEFSNVRF KGDDGKAEKT YQNTVALTPE DVSEAVWWVS TLPAHVNINT LEMMPVTQSY
AGLNVHRQ