Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1701 |
Symbol | |
ID | 6270410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1547869 |
End bp | 1548615 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641725781 |
Product | 3-hydroxy acid dehydrogenase |
Protein accession | YP_001880279 |
Protein GI | 187732067 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000649919 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGTTT TAGTAACTGG AGCAACGGCA GGTTTTGGTG AATGCATTAC TCGTCGTTTT ATTCAACAAG GGCATAAAGT TATCGCCACT GGCCGTCGCC AGGAACGGTT GCAGGTGTTA AAAGACGAAC TGGGAGATAA TCTGTACATC GCCCAACTGG ACGTTCGCAA CCGCGCCGCT ATTGAAGAGA TGCTGGCATC GCTTCCTGCC GAGTGGTGCA ATATTGATAT CCTGGTAAAT AATGCCGGCC TGGCGTTGGG CATGGAGCCT GCGCATAAAG CCAGCGTTGA AGACTGGGAA ACGATGATTG ATACCAACAA CAAAGGCCTG GTATATATGA CGCGCGCCGT CTTACCGGGT ATGGTTGAAC GTAATCATGG TCATATTATT AACATTGGCT CAACGGCAGG TAGCTGGCCT TATGCCGGTG GTAACGTTTA CGGTGCGACG AAAGCGTTTG TTCGTCAGTT TAGCCTGAAT CTGCGTACGG ACCTGCATGG TACGGCGGTG CGCGTCACCG ACATCGAACC GGGTCTGGTG GGTGGCACCG AGTTTTCCAA TGTCCGCTTT AAAGGCGATG ACGGTAAAGC GGAAAAAACC TATCAAAATA CCGTTGCATT GACGCCAGAA GATGTCAGCG AAGCCGTTTG GTGGGTGTCA ACGCTGCCTG CTCACGTCAA TATCAATACC CTGGAAATGA TGCCGGTTAC CCAAAGCTAT GCCGGACTGA ATGTCCACCG TCAGTAA
|
Protein sequence | MIVLVTGATA GFGECITRRF IQQGHKVIAT GRRQERLQVL KDELGDNLYI AQLDVRNRAA IEEMLASLPA EWCNIDILVN NAGLALGMEP AHKASVEDWE TMIDTNNKGL VYMTRAVLPG MVERNHGHII NIGSTAGSWP YAGGNVYGAT KAFVRQFSLN LRTDLHGTAV RVTDIEPGLV GGTEFSNVRF KGDDGKAEKT YQNTVALTPE DVSEAVWWVS TLPAHVNINT LEMMPVTQSY AGLNVHRQ
|
| |