Gene SbBS512_E1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1700 
Symbol 
ID6270851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp1547094 
End bp1547780 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content50% 
IMG OID641725780 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001880278 
Protein GI187730512 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000000855657 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCG AAACGCAACT TAATCCCACA CAGCCTGTCA ATCAGCAAAT TTATCGTATC 
CTTCGTCGCG ACATTGTCCA TTGCCTGATT GCTCCAGGCA CACCGTTGTC GGAAAAAGAA 
GTTTCTGTTC GTTTCAATGT GTCACGCCAG CCGGTTCGTG AAGCCTTTAT TAAACTGGCG 
GAAAACGGCC TGATTCAAAT TCGTCCACAG CGTGGCAGCT ACGTCAACAA AATTTCCATG 
GCCCAGGTGC GCAACGGCAG TTTTATCCGT CAGGCCATTG AGTGCGCGGT GGCGCGTCGG 
GCGGCGAGCA TGATTACCGA AAGCCAGTGC TACCAACTGG AACAAAATCT TCACCAGCAA 
CGCATTGCCA TTGAGCGCAA GCAACTGGAT GATTTTTTTG AACTTGATGA CAACTTCCAT 
CAACTCCTGA CGCAGATTGC CGACTGTCAA CTGGCGTGGG ATACCATTGA GAACCTGAAA 
GCGACCGTTG ATCGCGTGCA CTATATGAGT TTCGACCATG TTTCTCCACC AGAAATGCTG 
TTACGCCAGC ATCTTGATAT TTTCTCTGCC CTGCAAAAAC GTGATGGCGA TGCGGTAGAA 
CGTGCAATGA CGCAACATTT GCAGGAAATC AGCGAATCCG TGCGCCAGAT CCGCCAGGAA 
AACAGCGACT GGTTTAGCGA AGAGTAA
 
Protein sequence
MTVETQLNPT QPVNQQIYRI LRRDIVHCLI APGTPLSEKE VSVRFNVSRQ PVREAFIKLA 
ENGLIQIRPQ RGSYVNKISM AQVRNGSFIR QAIECAVARR AASMITESQC YQLEQNLHQQ 
RIAIERKQLD DFFELDDNFH QLLTQIADCQ LAWDTIENLK ATVDRVHYMS FDHVSPPEML 
LRQHLDIFSA LQKRDGDAVE RAMTQHLQEI SESVRQIRQE NSDWFSEE