| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1692 |
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| Symbol | |
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| ID | 6268639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1540884 |
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| End bp | 1542635 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641725773 |
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| Product | invasion plasmid antigen |
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| Protein accession | YP_001880271 |
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| Protein GI | 187732810 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.804686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCCGA CAAATAACAA TCACAGATTA ATTTCAAATT CGTTCTCCAC TTATTCAATC
GACACTAGCC GCGCATATGA AAGTTATCTA ACCCATTGGA CTGAATGGAA AAATAACCGC
ATACAAGAAG AACAACGAGA CATCGCTTTT CAGCGACTAG TATCATGTCT ACAAAACCAA
GAGACGAACC TAGACTTGTC TGAATTAGGC CTGACAACAT TACCTGAAAT CCCCCCGGGA
ATTAAATCAA TTAATATAAG TAAAAATAAT TTAAGCTTAA TCTCCCCATT GCCTGCGTCC
CTTACACAGC TTAATGTCAG CTATAACAGA CTTATTGAAC TGCCTGCTTT GCCTCAAGGA
CTTAAATTAT TGAATGCGTC CCACAATCAA CTAATCACAC TACCCACACT CCCCATATCT
TTGAAGGAGC TTCATGTCTC AAATAATCAA TTATGTTCTC TTCCTGTTTT ACCAGAACTA
CTGGAAACAT TAGATGTATC ATGTAATGGG CTGGCAGTTT TACCACCTTT ACCATTTTCT
TTACAAGAGA TTAGCGCAAT AGGGAATCTT CTTAGTGAAC TCCCCCCTCT ACCTCACAAC
ATTCACTCCA TATGGGCAAT CGACAATATG TTAACCGATA TTCCATACCT GCCGGAAAAT
TTAAGGAACG GTTATTTTGA CATAAATCAG ATAAGTCATA TCCCGGAAAG CATTCTTAAT
CTGAGGAATG AATGTTCAAT AGATATTAGT GATAACCCAT TGTCATCCCA TGCTCTGCAA
TCCCTGCAAA GATTAACCTC TTCGCCGGAC TACCACGGCC CGCAGATTTA CTTCTCCATG
AGTGACGGAC AACAGAATAC ACTCCATCGC CCCCTGGCTG ATGCCGTGAC AGCATGGTTC
CCGGAAAACA AACAATCTGA TGTATCACAG ATATGGCATG CTTTTGAACA TGAAGAGCAC
GCCAACACCT TTTCCGCGTT CCTTGACCGC CTTTCCGATA CCGTCTCTGC ACGCAATACC
TCCGGATTCC GTGAACAGGT CGCTGCATGG CTGGAAAAAC TCAGTGCCTC TGCGGAGCTT
CGACAGCAGT CTTTCGCTGT TGCTGCTGAT GCCACTGAGA GCTGTGAGGA CCGTGTCGCG
CTCACATGGA ACAATCTCCG GAAAACCCTC CTGGTCCATC AGGCATCAGA AGGCCTTTTC
GATAATGATA CCGGCGCTCT GCTCTCCCTG GGCAGGGAAA TGTTCCGCCT CGAAATTCTG
GAGGACATTG CCCGGGATAA AGTCAGAACT CTCCATTTTG TGGATGAGAT AGAAGTCTAC
CTGGCCTTCC AGACCATGCT CGCAGAGAAA CTTCAGCTCT CCACTGCCGT GAAGGAAATG
CGTTTCTATG GCGTGTCGGG AGTGACAGCA AATGACCTCC GCACTGCCGA AGCCATGGTC
AGAAGCCGTG AAGAGAATGA ATTTACGGAC TGGTTCTCCC TCTGGGGACC ATGGCATGCT
GTACTGAAGC GTACGGAAGC TGACCGCTGG GCGCTGGCAG AAGAGCAGAA ATATGAGATG
CTGGAGAATG AGTACCCTCA GAGGGTGGCT GACCGGCTGA AAGCATCAGG TCTGAGCGGT
GATGCGGATG CGGAGAGGGA AGCCGGTGCA CAGGTGATGC GTGAGACTGA ACAGCAGATT
TACCGTCAGC TGACTGACGA GGTACTGGCC CTGCGATTGT CTGAAAACGG CTCACAACTG
CACCATTCAT AA
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| Protein sequence | MLPTNNNHRL ISNSFSTYSI DTSRAYESYL THWTEWKNNR IQEEQRDIAF QRLVSCLQNQ
ETNLDLSELG LTTLPEIPPG IKSINISKNN LSLISPLPAS LTQLNVSYNR LIELPALPQG
LKLLNASHNQ LITLPTLPIS LKELHVSNNQ LCSLPVLPEL LETLDVSCNG LAVLPPLPFS
LQEISAIGNL LSELPPLPHN IHSIWAIDNM LTDIPYLPEN LRNGYFDINQ ISHIPESILN
LRNECSIDIS DNPLSSHALQ SLQRLTSSPD YHGPQIYFSM SDGQQNTLHR PLADAVTAWF
PENKQSDVSQ IWHAFEHEEH ANTFSAFLDR LSDTVSARNT SGFREQVAAW LEKLSASAEL
RQQSFAVAAD ATESCEDRVA LTWNNLRKTL LVHQASEGLF DNDTGALLSL GREMFRLEIL
EDIARDKVRT LHFVDEIEVY LAFQTMLAEK LQLSTAVKEM RFYGVSGVTA NDLRTAEAMV
RSREENEFTD WFSLWGPWHA VLKRTEADRW ALAEEQKYEM LENEYPQRVA DRLKASGLSG
DADAEREAGA QVMRETEQQI YRQLTDEVLA LRLSENGSQL HHS
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