| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1691 |
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| Symbol | |
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| ID | 6271405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1539077 |
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| End bp | 1540705 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641725772 |
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| Product | transposase (IS4 family) |
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| Protein accession | YP_001880270 |
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| Protein GI | 187730252 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0674671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTCCGG ATTTTTTTAT GCACATTGGA CAGGCTCTTG ATCTGGTATC CCGTTACGAT
TCTCTGCGTA ACCCACTGAC TTCTCTGGGG GATTACCTCG ACCCCGAACT CATCTCTCGT
TGCCTTGCCG AATCAGGTAC TGTAACGCTA CGCAAGCGCC GCCTTCCCCT CGAAATGATG
GTCTGGTGTA TTGTTGGCAT GGCGCTTGAG CGTAAAGAAC CTCTTCACCA GATTGTGAAT
CGCCTGGACA TCATGCTGCC GGGCAATCGC CCCTTCGTTG CCCCCAGTGC CGTTATTCAG
GCCCGCCAGC GCCTGGGAAG TGAGGCTGTC CGCCGCGTGT TCACGAAAAC AGCGCAGCTC
TGGCATAACG CCACGCCGCA TCCGCACTGG TGCGGCCTGA CCCTGCTGGC CATCGATGGT
GTGTTCTGGC GCACACCGGA TACACCAGAG AACGATGCAG CCTTCCCCCG CCAGACACAT
GCCGGGAACC CGGCGCTCCA CCCGCAGGTC AAAATGGTCT GCCAGATGGA ACTGACCAGC
CATCTGCTGA CGGCTGCAGC CTTCGGCACG ATGAAGAACA GCGAAAATGA GCTTGCTGAG
CAACTTATAG AACAAACCGG CGATAACACT CTGACGTTAA TGGATAAAGG TTATTACTCA
CTGGGACTGT TAAATGCCTG GAGCCTGGCG GGAGAACACC GCCACTGGAT GATACCTCTC
AGAAAGGGAG CGCAATATGA AGAGCTCAGA AAACTGGGTA AAGGCGATCA TCTGGTGAAG
CTGAAAACCA GCCCGCAGGC ACGAAAAAAG TGGCCGGGAC TGGGAAATGA AGTGACAGCC
CGCCTGCTGA CCGTGACGCG CAAAGGAAAA GTCTGCCATC TGCTGACGTC GATGACGGAC
GCCATGCGCT TCCCCGGAGG AGAAATGGCG GATCTGTACA GTCATCGCTG GGAAATTGAA
CTGGGATACA GGGAGATAAA ACAGACGATG CAACTGAGCA GGCTGACGCT GAGAAGTAAA
AAGCCGGAGC TTGTGGAGCA AGAGCTGTGG GGTGTCTTAC TGGCTTATAA TCTGGTGAGA
TATCAGATGA TTAAAATGGC GGAAAGTGGC GCAGTAGACT GTGACGTTTT TTTTGACGAC
AGGGACCAGG CAGTCCCCTA CACAGCCACC GCTGATGATG TCGCTCCGAC GGGTCAGCAA
ATCTGGCAGG AACTGCAAAG CGGCAAATGG GGTGAGATAG CCCCATTCAC TGTGACACCA
GAAATGCTGG AAGCGGCCAG AGAGGCCAGA CGTCAGGAAA TTGAAGCATG GCGCGCAGAA
CAGGAGGCGA AGCCGTTCAC GTTTGAATGG AACGGTCGTA TCTGGAATGC TGGTCCCGAC
TCACTGGGCC GCCTGTCCCC GGTAGTCATG CTGGCAAAAT CTGTCACAGC ACAAACACAT
ATGGCGTGGA GCGATGCCGA TAATCAGCAG GTGAAACTGT CGATGCCGGA ACTGGAAGAA
CTGGCGGCAG CAATGGTGCA GGCGCAGGTC GATCGCAACG ATGAGATTTA TCGCCGTCAG
CGTGAAATGA AAGAGGAGCT GAGCGGTCTG GATGATTTGG CTTCAATTCG GGCGTTTGAC
GTTGAGTAA
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| Protein sequence | MFPDFFMHIG QALDLVSRYD SLRNPLTSLG DYLDPELISR CLAESGTVTL RKRRLPLEMM
VWCIVGMALE RKEPLHQIVN RLDIMLPGNR PFVAPSAVIQ ARQRLGSEAV RRVFTKTAQL
WHNATPHPHW CGLTLLAIDG VFWRTPDTPE NDAAFPRQTH AGNPALHPQV KMVCQMELTS
HLLTAAAFGT MKNSENELAE QLIEQTGDNT LTLMDKGYYS LGLLNAWSLA GEHRHWMIPL
RKGAQYEELR KLGKGDHLVK LKTSPQARKK WPGLGNEVTA RLLTVTRKGK VCHLLTSMTD
AMRFPGGEMA DLYSHRWEIE LGYREIKQTM QLSRLTLRSK KPELVEQELW GVLLAYNLVR
YQMIKMAESG AVDCDVFFDD RDQAVPYTAT ADDVAPTGQQ IWQELQSGKW GEIAPFTVTP
EMLEAAREAR RQEIEAWRAE QEAKPFTFEW NGRIWNAGPD SLGRLSPVVM LAKSVTAQTH
MAWSDADNQQ VKLSMPELEE LAAAMVQAQV DRNDEIYRRQ REMKEELSGL DDLASIRAFD
VE
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