Gene SbBS512_E1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1690 
Symboltam 
ID6269293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1538256 
End bp1538987 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content55% 
IMG OID641725771 
Producttrans-aconitate 2-methyltransferase 
Protein accessionYP_001880269 
Protein GI187731399 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00892197 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACTTTT CCGCTGAACG ATCGCGTCCG GCGGTGGAGC TGCTTGCCAG AGTGCCGCTG 
GAAAATGTCG AATATGTCGC CGATCTTGGC TGTGGCCCAG GTAACAGCAC CGCCCTTCTA
CAACAACGTT GGCCTGCGGC CAGGATAACA GGCATCGACT CGTCTCCGGC GATGATTGCT
GAAGCGCGCA GTGCTTTGCC AGACTGCCAG TTCGTGGAAG CAGACATCCG CAACTGGCAA
CCGGTACAGG CACTCGATCT GATTTTTGCT AATGCCTCAC TGCAATGGCT GCCTGACCAC
TACGAATTGT TTCCTCACTT GGTTTCTTTA CTTAATCCGC AGGGCGTGCT GGCAGTACAG
ATGCCAGATA ACTGGCTGGA GCCGACCCAT GTGCTCATGC GCGAAGTTGC CTGGGAACAA
AACTACCCGG ATCGCGGGCG TGAGCCGTTG GCTGGCGTTC ATGCTTACTA CGATATTTTG
AGCGAAGCCG GATGTGAGGT CGATATCTGG CGAACCACCT ACTATCACCA GATGCCGTCG
CACCAGGCGA TTATCGATTG GGTGACCGCC ACTGGATTAC GTCCGTGGTT ACAGGATCTG
ACCGAGAGCG AACAGCAGCT TTTTCTTAAG CGCTACCATC AGATGCTGGA AGAGCAGTAT
CCACTGCAAG AGAACGGACA GATACTGCTG GCATTTCCGC GTCTTTTTAT TGTTGCCCGG
CGTATGGAGT AA
 
Protein sequence
MHFSAERSRP AVELLARVPL ENVEYVADLG CGPGNSTALL QQRWPAARIT GIDSSPAMIA 
EARSALPDCQ FVEADIRNWQ PVQALDLIFA NASLQWLPDH YELFPHLVSL LNPQGVLAVQ
MPDNWLEPTH VLMREVAWEQ NYPDRGREPL AGVHAYYDIL SEAGCEVDIW RTTYYHQMPS
HQAIIDWVTA TGLRPWLQDL TESEQQLFLK RYHQMLEEQY PLQENGQILL AFPRLFIVAR
RME