Gene SbBS512_E1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1664 
Symbol 
ID6273075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1517446 
End bp1518336 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID641725751 
ProductIS1203 transposase orfB 
Protein accessionYP_001880249 
Protein GI187733190 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCAC TGCTGGATAA GCTGCGTGAG CAGTACGGGG TCGGACCGCT ATGCAGCGAA 
CTGCATATTG CCCCGTCAAC GTATTACCAC TGTCAGCAAC AGCGACATCA TCCGGATAAA
CGCAGTGCCC GTGCGCAGCG CGATGACTGG CTGAAGAAAG AGATACAGCG CGTATACGAT
GAAAATCACA AGGTATACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GAAAGGCATC
AGAGTGGCCA GATGCACTGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC
CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA
AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC
AGCACATGGC AGGGCTTCGT CTATGTGGCG TTCATCATTG ATGTGTTTGC CGGATACATC
GTGGGGTGGC GGGTCTCATC GTCCATGGAA ACGACATTCG TGCTGGATGC TCTGGAGCAG
GCGTTATGGG CCCGTCGACC GTCCGGCACG GTCCATCACA GTGATAAAGG TTCTCAGTAT
GTATCGCTGG CCTACACACA GCGGCTTAAG GAAGCCGGAT TACTGGCATC AACAGGAAGT
ACAGGCGACT CGTATGACAA CGCGATGGCG GAGAGCATCA ATGGTCTTTA CAAAGCGGAG
GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTCACGTGG
GTGGACTGGT ATAATAATCG ACGATTGCTG GAAAGGCTGG GCCACATCCC TCCGGCAGAA
GCAGAAAAAG CTTATTATGC TTCTATCGGA AACGATGATC TGGCAGCCTG A
 
Protein sequence
MMPLLDKLRE QYGVGPLCSE LHIAPSTYYH CQQQRHHPDK RSARAQRDDW LKKEIQRVYD 
ENHKVYGVRK VWRQLLRKGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV
NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ
ALWARRPSGT VHHSDKGSQY VSLAYTQRLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE
VIHRKSWKNR AEVELATLTW VDWYNNRRLL ERLGHIPPAE AEKAYYASIG NDDLAA