Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1664 |
Symbol | |
ID | 6273075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1517446 |
End bp | 1518336 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641725751 |
Product | IS1203 transposase orfB |
Protein accession | YP_001880249 |
Protein GI | 187733190 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCAC TGCTGGATAA GCTGCGTGAG CAGTACGGGG TCGGACCGCT ATGCAGCGAA CTGCATATTG CCCCGTCAAC GTATTACCAC TGTCAGCAAC AGCGACATCA TCCGGATAAA CGCAGTGCCC GTGCGCAGCG CGATGACTGG CTGAAGAAAG AGATACAGCG CGTATACGAT GAAAATCACA AGGTATACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GAAAGGCATC AGAGTGGCCA GATGCACTGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC AGCACATGGC AGGGCTTCGT CTATGTGGCG TTCATCATTG ATGTGTTTGC CGGATACATC GTGGGGTGGC GGGTCTCATC GTCCATGGAA ACGACATTCG TGCTGGATGC TCTGGAGCAG GCGTTATGGG CCCGTCGACC GTCCGGCACG GTCCATCACA GTGATAAAGG TTCTCAGTAT GTATCGCTGG CCTACACACA GCGGCTTAAG GAAGCCGGAT TACTGGCATC AACAGGAAGT ACAGGCGACT CGTATGACAA CGCGATGGCG GAGAGCATCA ATGGTCTTTA CAAAGCGGAG GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTCACGTGG GTGGACTGGT ATAATAATCG ACGATTGCTG GAAAGGCTGG GCCACATCCC TCCGGCAGAA GCAGAAAAAG CTTATTATGC TTCTATCGGA AACGATGATC TGGCAGCCTG A
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Protein sequence | MMPLLDKLRE QYGVGPLCSE LHIAPSTYYH CQQQRHHPDK RSARAQRDDW LKKEIQRVYD ENHKVYGVRK VWRQLLRKGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ ALWARRPSGT VHHSDKGSQY VSLAYTQRLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE VIHRKSWKNR AEVELATLTW VDWYNNRRLL ERLGHIPPAE AEKAYYASIG NDDLAA
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