Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1636 |
Symbol | gap |
ID | 6270326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1492762 |
End bp | 1493415 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641725725 |
Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
Protein accession | YP_001880224 |
Protein GI | 187734227 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGATTT CCGCCCCTGC CGGTGAAATG AAAACTATCG TTTATAACGT CAATGACGAC ACTCTGGATG GCAACGACAC CATTGTTTCC GTGGCGTCAT GCACCACTAA CTGCCTTGCG CCGATGGCCA AAGCCTTGCA TGACAGTTTC GGGATAGAAG TCGGCACGAT GACGACCATT CATGCCTATA CTGGCACCCA GTCACTGGTG GATGGCCCAC GTGGTAAAGA TTTACGTGCT TCACGCGCAG CGGCAGAAAA TATCATTCCC CACACTACGG GGGCGGCAAA AGCCATTGGT CTGGAGATCC CGGAACTGAG CGGCAAACTG AAAGGTCATG CGCAACGCGT GCCGGTGAAA ACAGGTTCGG TCACTGAACT GGTATCGATT CTCGGAAAAA AAGTGACTGC CGAAGAGGTG AATAACGCAC TTAAACAAGC AACCACCAAT AACGAGTCAT TTGGTTATAC CGATGAAGAA ATAGTCTCTT CCGATATCAT TGGCAGCCAT TTCGGTTCGG TGTTTGATGC TACGCAAACG GAAATTACCG CCGTGGGCGA TTTACAACTG GTGAAAACGG TCGCCTGGTA CGATAACGAA TATGGCTTCG TCACGCAGCT TATTCGCACC CTCGAAAAAT TCGCTAAACT CTGA
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Protein sequence | MLISAPAGEM KTIVYNVNDD TLDGNDTIVS VASCTTNCLA PMAKALHDSF GIEVGTMTTI HAYTGTQSLV DGPRGKDLRA SRAAAENIIP HTTGAAKAIG LEIPELSGKL KGHAQRVPVK TGSVTELVSI LGKKVTAEEV NNALKQATTN NESFGYTDEE IVSSDIIGSH FGSVFDATQT EITAVGDLQL VKTVAWYDNE YGFVTQLIRT LEKFAKL
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