Gene SbBS512_E1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1623 
Symbol 
ID6272265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1479565 
End bp1480170 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID641725713 
ProductCDP-alcohol phosphatidyltransferase family protein 
Protein accessionYP_001880212 
Protein GI187732854 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCT ACCAGATAAA ACCGCTCTTT CAGTCGCTGT TAAGGCCGAC GATGTTTTGG 
CTTTATAAGC ACCACGTTAC AGCGAATCAC ATCACTCTTA CGGCACTGGC GCTTTCTCTT 
TTTACCGGAT TGCTGTTGGT GTTGGTGGCA CAACCCATCC TCTTTTTGCT ATTGCCCATC 
GTGCTTTTTA TCCGTATGGC GCTCAATGCG CTGGATGGCA TGTTGGCGCG TGAGTGCAAT 
CAGCAAACAC GTCTGGGGGC GATTTTGAAT GAAACTGGCG ATGTTATTTC CGATATTGCG 
CTCTATTTAC CGTTTTTATT TTTACCGGAA AGTAACGCAT CACTCGTAAT ACTCATGTTA 
TTTTGCACCA TATTGACTGA GTTTTGCGGT TTACTCGCGC AGACGATTAA CGGTATTCGT 
AGTTATGCCG GTCCATTCGG CAAAAGCGAT CGCGCGTTAA TATTTGGTCT GTGGGGGCTA 
GCCGTTGCCA TTTATCCACA GTGGATGCAA TGGAATAATC TTTTATGGAG CATTGCTTCA 
ATTCTGCTTC TCTGGACTGC GATTAATCGT TGTCGGAGTG TGCTTTTTAT GAGTGCTGAA 
AGATAA
 
Protein sequence
MTLYQIKPLF QSLLRPTMFW LYKHHVTANH ITLTALALSL FTGLLLVLVA QPILFLLLPI 
VLFIRMALNA LDGMLARECN QQTRLGAILN ETGDVISDIA LYLPFLFLPE SNASLVILML 
FCTILTEFCG LLAQTINGIR SYAGPFGKSD RALIFGLWGL AVAIYPQWMQ WNNLLWSIAS 
ILLLWTAINR CRSVLFMSAE R