| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1609 |
|---|
| Symbol | |
|---|
| ID | 6272242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 1463629 |
|---|
| End bp | 1464486 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641725699 |
|---|
| Product | chelated iron transport system membrane protein yfeD |
|---|
| Protein accession | YP_001880199 |
|---|
| Protein GI | 187730454 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000000716854 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAT TATTACTGGA GCCACTGCAG TTCACCTTTA TGAGTCACGC ACTGCTGATT
TCACTGGTAG TTTCCATACC CTGTGCGCTG CTGTCGGTCT TTCTGGTCCT GAAAGGTTGG
GCACTGATGG GTGACGCGAT GAGTCATGCG GTTTTTCCTG GCATCGTGCT TACCTGGATT
CTGGGGTTAC CTCTGGCTAC AGGGGCATTC GTCGCCGGAG TATTCTGCGC GGTGGCGACG
GGATACCTGA AAGACAACAG CCGAATCAAG CAAGATACAG TTATGGGGAT TGTTTTTTCT
GGCATGTTTG CCGCAGGTCT GATCTTGTAT ATTGCAATCA AACCAGACGT ACATCTTGAC
CATATTCTTT TCGGCGACAT GCTCGGGATA ACCATCGGCG ATATAATCCA GACGGTGATT
ATTGCCGGGC TGGTTACACT TGTTATTAGC GTAAAATGGC GGGATTTTTT GCTGTTCAGC
TTTGATTATC AACAGGCGCA GGTAAGCGGT TTGCATACGA GATGGCTGCA TTATGGGCTG
CTGTGCATGG TTTCCCTGAC CATTGTGGCG ACGCTGAAAG CAGTAGGTAT CATTCTCTCT
ATTTCTCTGC TCATTGCGCC TGGCGCCATT GCAGTACTCC TGACACAACG CTTTCATATT
GCGCTCCTAC TGGCGACTGG CATATCGGTA ATAGTGTCAA TGACTGGTGT CTGGCTGTCC
TTTTTTATCG ACAGCGCACC AGCTCCGACG ATTGTCGTCT TATTCGCGGT CGTGTTCATC
ATGACGTTTA CCGTTACCAG CATCAACGCA CGCACAAAGG GAAACGCCCA TACACAGGAT
CTGTTATCAC CCAATTAG
|
|---|
| Protein sequence | MMALLLEPLQ FTFMSHALLI SLVVSIPCAL LSVFLVLKGW ALMGDAMSHA VFPGIVLTWI
LGLPLATGAF VAGVFCAVAT GYLKDNSRIK QDTVMGIVFS GMFAAGLILY IAIKPDVHLD
HILFGDMLGI TIGDIIQTVI IAGLVTLVIS VKWRDFLLFS FDYQQAQVSG LHTRWLHYGL
LCMVSLTIVA TLKAVGIILS ISLLIAPGAI AVLLTQRFHI ALLLATGISV IVSMTGVWLS
FFIDSAPAPT IVVLFAVVFI MTFTVTSINA RTKGNAHTQD LLSPN
|
|---|
| |