Gene SbBS512_E1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1609 
Symbol 
ID6272242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1463629 
End bp1464486 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID641725699 
Productchelated iron transport system membrane protein yfeD 
Protein accessionYP_001880199 
Protein GI187730454 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000716854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCAT TATTACTGGA GCCACTGCAG TTCACCTTTA TGAGTCACGC ACTGCTGATT 
TCACTGGTAG TTTCCATACC CTGTGCGCTG CTGTCGGTCT TTCTGGTCCT GAAAGGTTGG
GCACTGATGG GTGACGCGAT GAGTCATGCG GTTTTTCCTG GCATCGTGCT TACCTGGATT
CTGGGGTTAC CTCTGGCTAC AGGGGCATTC GTCGCCGGAG TATTCTGCGC GGTGGCGACG
GGATACCTGA AAGACAACAG CCGAATCAAG CAAGATACAG TTATGGGGAT TGTTTTTTCT
GGCATGTTTG CCGCAGGTCT GATCTTGTAT ATTGCAATCA AACCAGACGT ACATCTTGAC
CATATTCTTT TCGGCGACAT GCTCGGGATA ACCATCGGCG ATATAATCCA GACGGTGATT
ATTGCCGGGC TGGTTACACT TGTTATTAGC GTAAAATGGC GGGATTTTTT GCTGTTCAGC
TTTGATTATC AACAGGCGCA GGTAAGCGGT TTGCATACGA GATGGCTGCA TTATGGGCTG
CTGTGCATGG TTTCCCTGAC CATTGTGGCG ACGCTGAAAG CAGTAGGTAT CATTCTCTCT
ATTTCTCTGC TCATTGCGCC TGGCGCCATT GCAGTACTCC TGACACAACG CTTTCATATT
GCGCTCCTAC TGGCGACTGG CATATCGGTA ATAGTGTCAA TGACTGGTGT CTGGCTGTCC
TTTTTTATCG ACAGCGCACC AGCTCCGACG ATTGTCGTCT TATTCGCGGT CGTGTTCATC
ATGACGTTTA CCGTTACCAG CATCAACGCA CGCACAAAGG GAAACGCCCA TACACAGGAT
CTGTTATCAC CCAATTAG
 
Protein sequence
MMALLLEPLQ FTFMSHALLI SLVVSIPCAL LSVFLVLKGW ALMGDAMSHA VFPGIVLTWI 
LGLPLATGAF VAGVFCAVAT GYLKDNSRIK QDTVMGIVFS GMFAAGLILY IAIKPDVHLD
HILFGDMLGI TIGDIIQTVI IAGLVTLVIS VKWRDFLLFS FDYQQAQVSG LHTRWLHYGL
LCMVSLTIVA TLKAVGIILS ISLLIAPGAI AVLLTQRFHI ALLLATGISV IVSMTGVWLS
FFIDSAPAPT IVVLFAVVFI MTFTVTSINA RTKGNAHTQD LLSPN