Gene SbBS512_E1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1598 
Symbol 
ID6268546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1457319 
End bp1457621 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content46% 
IMG OID641725688 
ProductISSd1, transposase orfA/B, fusion 
Protein accessionYP_001880192 
Protein GI187734198 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0063683 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGAA AAAACCAACG TTACTCTAAA GAGTTCAAAG CCGAAGCTGT CAGAACGGTT 
CTTGAAAATC AACTTTCGAT CAGTGAAGGC GCTTCCCGAT TATCCCTTCC TGAAGGCACT
TTAGGACAAT GGGTTACCGC CGCCAGAAAA GGGCTCGGTA CTCCTGGTTC CCGCACGGTG
GCTGAACTGG AATCTGAAAT TCTGCAACTG CGTAAGGCGT TAAATGAAGC TCGCCTTGAG
CGAGATATAT TAAAAAAAGC AACCGTGTAT TTTGCACAGG AGTCGCTGAA AAATACGCGT
TAA
 
Protein sequence
MSRKNQRYSK EFKAEAVRTV LENQLSISEG ASRLSLPEGT LGQWVTAARK GLGTPGSRTV 
AELESEILQL RKALNEARLE RDILKKATVY FAQESLKNTR