| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1570 |
|---|
| Symbol | |
|---|
| ID | 6269255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 1431465 |
|---|
| End bp | 1432496 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641725662 |
|---|
| Product | transporter, small conductance mechanosensitive ion channel family |
|---|
| Protein accession | YP_001880168 |
|---|
| Protein GI | 187730973 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCTG AACTGTTTAC AAATAATGCG CTTAATCTGG TCATTATTTT CGGTAGCTGC
GCAGCATTGA TTCTGATGAG CTTTTGGTTT CGCCGCGGAA ATCGTAAAAG AAAAGGTTTT
TTATTCCATG CGGTGCAATT TTTAATCTAC ACCATAATTA TCAGTGCTGT TGGTAGCATT
ATTAATTATG TTATAGAAAA CTATAAACTC AAATTTATCA CCCCAGGCGT TATCGATTTT
ATCTGTACGT CCCTGATTGC GGTTATTCTG ACGATTAAGC TATTTTTGCT GATTAATCAG
TTTGAAAAAC AGCAGATTAA AAAAGGTCGC GATATCACCA GTGCGCGGAT TATGTCGCGC
ATTATCAAAA TCACCATTAT TGTGGTGCTT GTTCTGCTTT ATGGCGAACA TTTCGGCATG
AGCCTTTCTG GCTTGCTGAC CTTTGGTGGT ATTGGTGGTC TGGCTGTCGG TATGGCCGGT
AAAGATATTC TGAGTAATTT CTTTTCCGGG ATCATGCTCT ATTTCGACCG TCCTTTCAGT
ATTGGCGACT GGATCCGTTC ACCGGACAGA AATATCGAAG GTACAGTAGC GGAAATTGGC
TGGCGAATTA CCAAAATTAC GACCTTTGAT AATCGTCCAT TGTACGTACC GAACTCGCTG
TTTTCGTCGA TCAGCGTAGA AAACCCAGGA CGAATGACCA ACCGCCGCAT TACCACGACC
ATTGGTTTAC GTTATGAGGA TGCGGCAAAA GTGGGCGTTA TTGTCGAAGC CGTACGTGAG
ATGCTGAAAA ATCACCCGGC CATCGACCAG CGACAAACCT TACTGGTTTA TTTCAACCAG
TTTGCCGACT CGTCATTGAA TATTATGGTT TATTGCTTTA CCAAAACCAC GGTATGGGCT
GAATGGCTTG CTGCACAACA AGACGTTTAT TTGAAGATTA TCGATATTGT GCAGTCACAC
GGCGCGGACT TTGCCTTCCC CAGCCAGACG CTGTATATGG ATAACATTAC ACCGCCGGAA
CAGGGGCGCT AA
|
|---|
| Protein sequence | MIAELFTNNA LNLVIIFGSC AALILMSFWF RRGNRKRKGF LFHAVQFLIY TIIISAVGSI
INYVIENYKL KFITPGVIDF ICTSLIAVIL TIKLFLLINQ FEKQQIKKGR DITSARIMSR
IIKITIIVVL VLLYGEHFGM SLSGLLTFGG IGGLAVGMAG KDILSNFFSG IMLYFDRPFS
IGDWIRSPDR NIEGTVAEIG WRITKITTFD NRPLYVPNSL FSSISVENPG RMTNRRITTT
IGLRYEDAAK VGVIVEAVRE MLKNHPAIDQ RQTLLVYFNQ FADSSLNIMV YCFTKTTVWA
EWLAAQQDVY LKIIDIVQSH GADFAFPSQT LYMDNITPPE QGR
|
|---|
| |