Gene SbBS512_E1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1559 
Symbol 
ID6269755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1421446 
End bp1422411 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content54% 
IMG OID641725652 
Productmandelate racemase/muconate lactonizing enzyme family protein 
Protein accessionYP_001880158 
Protein GI187730278 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACCG TTAAGGTATT TGAGGAAGCC TGGCCCTTAC ATACCCCGTT TGTGATTGCC 
CGGGGAAGTC GCAGTGAAGC GCGCGTGGTG GTGGTTGAAC TGGAAGAAGA GGGTATTAAA 
GGCACCGGCG AATGCACGCC GTATCCGCGT TATGGAGAAA GTGATGCCTC GGTAATGGCG 
CAAATTATGA GCGTCGTGTC GCAATTAGAG AAAGGGCTGA CACGGGAGGA GTTGCAAAAA 
ATTCTCCCTG CCGGCGCAGC ACGTAATGCG CTGGATTGTG CATTGTGGGA TCTGGCCGCG 
CGAAAACAGC AGCAATCGCT GGCTGATTTG ATCGGCATAA CGCTTCCCGA GACAGTTATC 
ACTGCACAGA CGGTAGTCAT CGGTACGCCT GATCAGATGG CCAATAGTGC ATCAACACTC 
TGGCAGGCAG GCGCGAAATT ACTGAAAGTG AAGCTGGATA ACCATCTTAT TAGTGAGCGG 
ATGGTGGCAA TTCGCACAGC TGTGCCCGAT GCGACGCTGA TCGTTGATGC AAATGAATCC 
TGGCGTGCAG AAGGGTTGGC GGCGCGTTGC CAGCTATTGG CGGATTTAGG CGTTGCGATG 
CTTGAACAAC CCCTTCCTGC GCAGGACGAT GCGGCGCTGG AGAATTTTAT TCATCCGTTG 
CCGATTTGTG CTGATGAGAG TTGTCATACA CGTAGCAATC TGAAGGCGCT GAAAGGGCGC 
TATGAGATGG TTAACATTAA GCTCGATAAA ACCGGTGGTC TGACGGAAGC GCTGGCGCTG 
GCGACTGAAG CGCGTGCACA AGGTTTCAGT CTGATGCTGG GCTGCATGTT GTGTACCTCT 
CGTGCCATTA GCGCCGCTTT ACCGCTGGTG CCGCAGGTCA GTTTCGCCGA TCTTGACGGA 
CCGACCTGGC TGGCGGTAGA TGTGGAACCG GCGCTTCAGT TCACGACGGG CGAATTGCAT 
CTTTAG
 
Protein sequence
MRTVKVFEEA WPLHTPFVIA RGSRSEARVV VVELEEEGIK GTGECTPYPR YGESDASVMA 
QIMSVVSQLE KGLTREELQK ILPAGAARNA LDCALWDLAA RKQQQSLADL IGITLPETVI 
TAQTVVIGTP DQMANSASTL WQAGAKLLKV KLDNHLISER MVAIRTAVPD ATLIVDANES 
WRAEGLAARC QLLADLGVAM LEQPLPAQDD AALENFIHPL PICADESCHT RSNLKALKGR 
YEMVNIKLDK TGGLTEALAL ATEARAQGFS LMLGCMLCTS RAISAALPLV PQVSFADLDG 
PTWLAVDVEP ALQFTTGELH L