| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1556 |
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| Symbol | tyrR |
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| ID | 6269631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1419236 |
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| End bp | 1420777 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641725650 |
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| Product | DNA-binding transcriptional regulator TyrR |
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| Protein accession | YP_001880156 |
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| Protein GI | 187730333 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGG AAGTCTTTTG TGAAGACCGA CTCGGTCTGA CCCGCGAATT ACTCGATCTA
CTCGTGCTAA GAGGCATTGA TTTACGCGGT ATTGAGATTG ATCCCATTGG GCGAATCTAC
CTCAATTTTG CTGAACTGGA GTTTGAGAGT TTCAGCAGTC TGATGGCCGA AATACGCCGT
ATTGCAGGTG TTACCGATGT GCGTACTGTC CCGTGGATGC CTTCCGAACG TGAGCATCTG
GCGTTGAGCG CGTTACTGGA GGCGTTGCCC GAACCTGTGC TCTCTGTCGA TATGAAAAGC
AAAGTGGATA TGGCGAACCC GGCGAGCTGT CAGCTTTTTG GGCAAAAATT GGATCGCCTG
CGCAACCATA CCGCCGCACA ATTGATTAAC GGCTTTAATT TTTTACGTTG GCTGGAAAGC
GAACCGCAAG ATTCGCATAA CGAGCATGTC GTTATTAATG GGCAGAATTT CCTGATGGAG
ATTACGCCTG TTTATCTTCA GGATGAAAAT GATCAACACG TCCTGACCGG TGCGGTGGTG
ATGTTGCGAT CAACGATTCG TATGGGCCGC CAGTTGCAAA ATGTCGCCGC CCAGGACGTC
AGCGCCTTCA GTCAAATTGT CGCCGTCAGC CCGAAAATGA AGCATGTTGT CGAACAGGCG
CAGAAACTGG CGATGCTAAG CGCGCCGCTG CTGATTACGG GTGACACAGG TACAGGTAAA
GATCTCTTTG CCTACGCCTG CCATCAGGCA AGCCCCAGAG CGGGCAAACC TTACCTGGCG
CTGAACTGTG CGTCTATACC GGAAGATGCG GTCGAGAGTG AACTGTTTGG TCATGCTCCG
GAAGGGAAGA AAGGATTCTT TGAGCAGGCG AACGGTGGTT CGGTGCTGTT GGATGAAATA
GGGGAAATGT CACCACGGAT GCAGGCGAAA TTACTGCGTT TTCTTAATGA TGGCACTTTC
CGTCGGGTTG GCGAAGACCA TGAGGTGCAT GTCGATGTGC GGGTGATTTG CGCTACGCAG
AAGAATCTGG TCGAACTGGT GCAAAAAGGC ATGTTCCGTG AAGATCTCTA TTATCGTCTG
AACGTGTTGA CGCTCAATCT GCCGCCGCTA CGTGACTGTC CGCAGGACAT CATGCCGTTA
ACTGAGCTGT TCGTCGCCCG CTTTGCCGAC GAGCAGGGCG TGCCGCGTCC GAAACTGGCC
GCTGACCTGA ATACTGTACT TACGCGTTAT GCGTGGCCGG GAAATGTGCG GCAGTTAAAG
AACGCTATCT ATCGCGCACT GACACAACTG GACGGTTATG AGCTGCGTCC ACAGGATATT
TTGTTGCCGG ATTATGACGC CGCAACGGTA GCCGTGGGCG AAGATGCGAT GGAAGGTTCG
CTGGACGAAA TCACCAGCCG TTTTGAACGC TCGGTATTAA CCCAGCTTTA TCGCAATTAT
CCCAGCACGC GCAAACTGGC AAAACGTCTC GGCGTTTCAC ATACCGCGAT TGCCAATAAG
TTGCGGGAAT ATGGCTTAAG CCAGAAGAAG AACGAAGAGT AA
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| Protein sequence | MRLEVFCEDR LGLTRELLDL LVLRGIDLRG IEIDPIGRIY LNFAELEFES FSSLMAEIRR
IAGVTDVRTV PWMPSEREHL ALSALLEALP EPVLSVDMKS KVDMANPASC QLFGQKLDRL
RNHTAAQLIN GFNFLRWLES EPQDSHNEHV VINGQNFLME ITPVYLQDEN DQHVLTGAVV
MLRSTIRMGR QLQNVAAQDV SAFSQIVAVS PKMKHVVEQA QKLAMLSAPL LITGDTGTGK
DLFAYACHQA SPRAGKPYLA LNCASIPEDA VESELFGHAP EGKKGFFEQA NGGSVLLDEI
GEMSPRMQAK LLRFLNDGTF RRVGEDHEVH VDVRVICATQ KNLVELVQKG MFREDLYYRL
NVLTLNLPPL RDCPQDIMPL TELFVARFAD EQGVPRPKLA ADLNTVLTRY AWPGNVRQLK
NAIYRALTQL DGYELRPQDI LLPDYDAATV AVGEDAMEGS LDEITSRFER SVLTQLYRNY
PSTRKLAKRL GVSHTAIANK LREYGLSQKK NEE
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