Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1540 |
Symbol | pspA |
ID | 6271125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1409531 |
End bp | 1410199 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641725637 |
Product | phage shock protein PspA |
Protein accession | YP_001880143 |
Protein GI | 187730683 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTATTT TTTCTCGCTT TGCCGACATC GTGAATGCCA ACATCAACGC TCTGTTAGAG AAAGCGGAAG ATCCACAGAA ACTGGTGCGT CTGATGATCC AGGAGATGGA AGATACTCTG GTTGAAGTAC GTTCTACTTC GGCGCGTGCG TTGGCAGAAA AGAAACAGCT GACTCGCCGT ATTGAACAAG CGTCGGCGCG TGAAGTTGAA TGGCAGGAAA AAGCCGAACT GGCGCTGCTG AAAGAGAGAG AGGATTTGGC ACGTGCGGCG TTAATTGAAA AACAGAAACT GACCGATCTG ATTAAGAGTC TGGAACATGA AGTGACGCTG GTGGACGATA CGCTGGCACG CATGAAGAAA GAGATCGGTG AGCTGGAAAA CAAATTGAGC GAAACACGCG CTCGCCAGCA GGCATTGATG TTACGCCATC AGGCGGCAAA CTCGTCGCGC GATGTGCGTC GTCAGCTGGA CAGTGGCAAA CTGGATGAAG CAATGGCTCG TTTCGAATCT TTCGAACGTC GTATTGACCA GATGGAAGCG GAAGCAGAAA GCCACAGCTT CGGTAAACAA AAATCGCTGG ACGATCAGTT TGCCGAACTG AAAGCCGATG ATGCAATCAG CGAACAACTG GCACAATTAA AAGCCAAAAT GAAGCAAGAC AATCAATAA
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Protein sequence | MGIFSRFADI VNANINALLE KAEDPQKLVR LMIQEMEDTL VEVRSTSARA LAEKKQLTRR IEQASAREVE WQEKAELALL KEREDLARAA LIEKQKLTDL IKSLEHEVTL VDDTLARMKK EIGELENKLS ETRARQQALM LRHQAANSSR DVRRQLDSGK LDEAMARFES FERRIDQMEA EAESHSFGKQ KSLDDQFAEL KADDAISEQL AQLKAKMKQD NQ
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