| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1538 |
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| Symbol | gabT1 |
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| ID | 6269406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1407002 |
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| End bp | 1408267 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641725635 |
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| Product | 4-aminobutyrate transaminase |
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| Protein accession | YP_001880141 |
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| Protein GI | 187734236 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.535334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA ATGAATTCCA TCAGCGTCGT CTTTCTGCTA CCCCACGCGG GGTTGGCGTG
ATGTGTAACT TCTTCGCCCA GTCGGCAGAA AACGCTACGC TGAAGGACGT AGAGGGCAAC
GAATACATCG ATTTCGCCGC AGGCATTGCG GTGCTGAATA CCGGGCATCG CCACCCTGAT
CTGGTCGCGG CGGTGGAGCA GCAATTGCAA CAGTTTACCC ACACGGCGTA TCAGATTGTG
CCGTACGAAA GCTACGTCAC GCTGGCGGAG AAAATTAACG CCCTTGCCCC AGTGAGCGGG
CAGGCTAAAA CCGCATTCTT CACTACCGGC GCGGAAGCGG TGGAAAACGC GGTGAAAATT
GCTCGCGCCC ATACCGGACG ACCTGGCGTG ATTGCGTTTA GCGGCGGCTT CCACGGTCGT
ACATATATGA CCATGGCGCT GACCGGAAAA GTTGCGCCGT ACAAAATCGG CTTCGGCCCG
TTCCCTGGTT CGGTGTATCA CGTACCTTAT CCGTCAGATT TACACGGCAT TTCAACACAG
GACTCCCTCG ACGCCATCGA ATGCTTGTTT AAATCGGACA TTGAAGCGAA GCAGGTGGCG
GCCATTATTT TCGAACCGGT GCAGGGCGAG GGCGGTTTCA ACGTTGCGCC AAAAGAGCTG
GTTGCCGCCA TTCGCCGCCT GTGCGACGAG CACGGTATTG TGATGATTGC CGATGAAGTG
CAAAGCGGCT TTGCGCGTAC CGGTAAACTG TTTGCCATGG ATCATTACGC CGATAAGCCG
GACTTAATGA CGATGGCGAA AAGCCTCGCG GGCGGGATGC CGCTTTCGGG CGTGGTCGGT
AACGCGAATA TTATGGACGC GCCCGCGCCG GGCGGGTTGG GTGGCACCTA CGCCGGGAAC
CCGCTGGCGG TGGCTGCCGC GCACGCGGTG CTCAATATTA TCGACAAAGA ATCACTCTGC
GAACGCGCGA ATCAACTGGG CCAGCGTCTC AAAAACACGT TGATTGATGC CAAAGAAAGC
GTTCCGGCCA TTGCTGCGGT ACGCGGCCTG GGGTCGATGA TTGCGGCAGA GTTTAACGAT
CCGCAAACGG GCGAGCCGTC AGCGGCGATT GCACAGAAAA TCCAGCAACG CGCGCTGGCG
CAGGGGCTGC TCCTGCTGAC CTGTGGCGCA TACGGCAACG TGATTCGCTT CCTGTATCCG
CTGACCATCC CGGATGCGCA ATTCGATGCG GCAATGAAAA TTTTGCAGGA TGCGCTGAGC
GATTAA
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| Protein sequence | MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA VLNTGHRHPD
LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG QAKTAFFTTG AEAVENAVKI
ARAHTGRPGV IAFSGGFHGR TYMTMALTGK VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ
DSLDAIECLF KSDIEAKQVA AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV
QSGFARTGKL FAMDHYADKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN
PLAVAAAHAV LNIIDKESLC ERANQLGQRL KNTLIDAKES VPAIAAVRGL GSMIAAEFND
PQTGEPSAAI AQKIQQRALA QGLLLLTCGA YGNVIRFLYP LTIPDAQFDA AMKILQDALS
D
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