| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1493 |
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| Symbol | rluB |
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| ID | 6269775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1363721 |
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| End bp | 1364593 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641725593 |
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| Product | 23S rRNA pseudouridylate synthase B |
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| Protein accession | YP_001880099 |
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| Protein GI | 187731466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA AATTACAGAA AGTGCTGGCC CGCGCTGGCC ACGGCTCCCG CCGTGAAATC
GAATCTATTA TTGAAGCCGG TCGTGTGAGT GTTGATGGCA AAATTGCTAA ACTCGGCGAT
CGCGTTGAAG TTACCCCTGG GCTGAAAATT CGTATCGATG GTCATCTGAT TTCGGTACGT
GAGTCCGCTG AACAAATTTG TCGCGTTCTG GCCTATTACA AACCGGAAGG TGAGTTGTGT
ACCCGTAACG ATCCGGAAGG GCGTCCGACG GTGTTTGACC GTCTGCCAAA GCTGCGTGGC
GCACGCTGGA TTGCCGTAGG TCGTCTGGAC GTTAACACCT GTGGTCTGCT GCTGTTCACC
ACCGATGGTG AACTGGCAAA CCGTTTAATG CATCCAAGCC GTGAAGTTGA ACGTGAATAC
GCCGTGCGTG TATTTGGTCA GGTTGACGAC GCGAAACTGC GTGATTTGAG TCGTGGCGTG
CAACTGGAAG ATGGTCCGGC AGCTTTTAAA ATCATCAAGT TCAGCGGCGG CGAAGGGATC
AACCAGTGGT ACAACGTGAC TCTGACCGAA GGCCGTAACC GTGAAGTTCG TCGTCTGTGG
GAAGCGGTTG GTGTGCAGGT GAGCCGCCTG ATCCGTGTTC GTTACGGTGA TATCCCACTG
CCAAAAGGTC TGCCACGCGG TGGCTGGACG GAGCTGGACC TCGCCCAGAC TAACTATCTG
CGCGAACTGG TGGAGCTTCC GCCAGAAACC AGCTCTAAAG TCGCTGTAGA AAAAGACCGT
CGTCGCATGA AGGCTAATCA GATTCGTCGT GCGGTGAAAC GTCACAGTCA GGTGAGCGGC
GGTCGTCGTT CTGGCGGGCG TAATAACGGT TAA
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| Protein sequence | MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIAKLGD RVEVTPGLKI RIDGHLISVR
ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT
TDGELANRLM HPSREVEREY AVRVFGQVDD AKLRDLSRGV QLEDGPAAFK IIKFSGGEGI
NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL
RELVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQVSG GRRSGGRNNG
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