Gene SbBS512_E1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1479 
Symbol 
ID6272569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1349886 
End bp1350470 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content48% 
IMG OID641725579 
Producttail fiber assembly protein 
Protein accessionYP_001880085 
Protein GI187730223 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCA GAATGAGTGA ACAAGCACGG ACCATAAAAA TTTATAATCT GCTGGCCGGA 
ACTAATGAAT TTATTGGTGA AGGTGACGCA TATATTCCGC CTCATACAGG TCTGCCAGCA
AATAGTACCG ATATTGCACC ACCAGATATT CCTGCTGGCT TTGTGGCTGT TTTCAACAGT
GATGAGGCAT CGTGGCATCT CGTTGAAGAC CATCGGGGTA AAACGGTTTA TGACGTAGCG
TCAGGGGACG AGTTATTTAT TTCTGAACTC GGTCCGTTAC CGGAAAATGT TACCTGGTTA
TCGCCGGAAG GGGAGTTTCA GAAGTGGAAC GGCACAGCCT GGGTGAAGGA TACGGAAGCA
GAAAAAATGT TCCGGATCCG GGAGGCGGAA GAAACAAAAA ACAACCTGAT GCAGGTAGCC
AGTGAGCATA TTGCGCCGCT TCAGGATGCT GCAGATCTGG AAATTGCAAC GGAGGAAGAA
ACCTCATTGC TGGAAGCCTG GAAAAAGTAT CGGGTGTTGC TGAACCGTGT TGATACATCA
ACTGCACCTG ATATTGAGTG GCCTACGAAC CCTGTCAGGG AGTAA
 
Protein sequence
MAFRMSEQAR TIKIYNLLAG TNEFIGEGDA YIPPHTGLPA NSTDIAPPDI PAGFVAVFNS 
DEASWHLVED HRGKTVYDVA SGDELFISEL GPLPENVTWL SPEGEFQKWN GTAWVKDTEA
EKMFRIREAE ETKNNLMQVA SEHIAPLQDA ADLEIATEEE TSLLEAWKKY RVLLNRVDTS
TAPDIEWPTN PVRE