| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1467 |
|---|
| Symbol | |
|---|
| ID | 6268753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 1337250 |
|---|
| End bp | 1339823 |
|---|
| Gene Length | 2574 bp |
|---|
| Protein Length | 857 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641725568 |
|---|
| Product | tail length tape measure protein |
|---|
| Protein accession | YP_001880074 |
|---|
| Protein GI | 187732238 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5281] Phage-related minor tail protein |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01541] phage tail tape measure protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGC CGGTTGGTGA TCTTGTTATT GACCTGAGTC TGGATGCTGT CCGTTTCGAT
GAGCAGATGA GCCGGGTAAG GCGTCATTTT TCAGGTCTGG ATACCGACGC CAGAAAAACC
GCCAGTGCTG TTGAACAGGG CCTGAGCCGC CAGGCGCTGG CTGCACAAAA AGCCGGGATT
TCCGTCGGGC AGTATAAAGC GGCCATGCGA ACCCTGCCCG CACAGTTTAC GGATATCGCC
ACGCAGCTTG CCGGTGGTCA GAATCCCTGG TTGATCCTGC TGCAACAGGG CGGTCAGGTG
AAGGACTCCT TCGGCGGGAT GATCCCCATG TTCAGGGGGC TTGCCGGTGC GATCACCCTG
CCGATGGTCG GGGTCACCTC GCTGGCGGTG GCGACAGGTG CGCTGGCGTA CGCCTGGTAC
CAGGGCGACG CCACGCTTTC AGAATTTAAT AAAACGCTGG TCCTTTCCGG CAATCAGGCC
GGACTGACTG CCGATCGTAT GCTGACGCTC TCAAGAGCCG GGCAGGCAGC AGGGCTGACG
TTTAACCAGG CGAGAGAGTC ACTGGCAGCC CTGGTGAATG CCGGTGTGCG TGGTGGTGAA
CAGTTTGATG CCATCAACCA GAGTGTCGCG CGTTTTGCGT CTGCATCCGG TGTGGAGGTG
GATAAAGTCG CTGAAGCCTT CGGGAAGCTG ACCACTGACC CGACGTCGGG ACTGATGGCG
ATGGCGCGCC AGTTCCGTAA CGTGACGGCA GAGCAGATTG CGTATGTTGC ACAGCTGCAG
CGTTCCGGAG ACGAGGCCGG GGCATTGCAG GCGGCGAACG ATATCGCCAC GAAAGGCTTT
GATGAGCAGA CCCGTCGCCT GAAAGAAAAC ATGGGAACAC TGGAGACCTG GGCGGATAAA
ACAGGGAAGG CATTCAAATC GATGTGGGAT GCCATTCTGG ATATCGGTCG TCCGGAATCC
TCAGCGGATA TGCTCGCCAG TGCGCAGAAG GCATTTGATG AGGCGGATAA AAAATGGCAG
TGGTACCAGA GCCGGAGCCA GCGCCGGGGA AAGACCTCCT CTTTTCGTGC GAACCTTCAG
GGGGCATGGG ATGACCGGGA AAATGCCCGT CTGGGTCTGG CAGCGGCCAC GCTGCAGTCG
GATATGGAAA AAGCCGGTGA ACTGGCGGCA AGGGACAGGG CTGAGCGTGA GTCGTCACAG
CTGAAGTATA CCGGAGAGGC GCAGAAGGCG TATGAGCGCC TGCAGACGCC GCTGGATAAA
TATACCGCCC GTCAGAAAGA GCTGAATAAG GCCCTGAAAG ACGGAAAAAT CCTGCAGGCG
GATTACAACA CGCTGATGGC GTCGGCAAAA AAGGATTATG AATCGACGCT GAAAAAGCCG
TCAGGTGTGA AGGTGTCTGC CGGTGAGCGC CAGGAAGACC GGGCGCATGC AGCCCTGCTG
GCGCTTGAAA CCGAGCTCAG GACGCTGGAA AAACACAGCG GTGTGAATGA GAAAATCAGC
CAGCAGCGCC GGGATTTATG GGAAGCGGAA AGTCAATATG TGGTCCTGAA AGAGGCCGCC
ACGAAACGGC AGTTATCTGA GCAGGAAAAA TCCCTGCTGG CTCATGAGAA AGAGACGCTG
GAGTACAAAC GCCAGCTGGC TGAGCTGGGA GACAAGATTG AACACCAGAA GCGGCTGAAT
GAGCTGGCAC AGCAGGCGGC GCGGTTTGAA CAGCAGCAAA GCGCGAAGCA GGCGGCAATC
AGCGCAAAAG CCCGCGGCCT CACCGACCGT CAGGCGCAGC GGGAGTCGGA AGAGCAGCGC
CTTCGTGAGG TGTACGGTGA TAATCCGGCT GCGCTGGCGA AGGCCACATC GGCACTGAAG
AACACCTGGT CTGCGGAGGA GCAGCTTCGT GGAAGCTGGA TGGCCGGGAT GAAGTCCGGC
TGGAGTGAGT GGGAAGAGAG CGCCACGGAC AGTATGTCGC AGGTTAAAAG TGCTGCCACG
CAGACCTTTG ATGGTATTGC ACAGAATATG GCGGCGATGC TGACCGGCAG TGAGCAGAAC
TGGCGCAGCT TCACCCGTTC CGTGCTGTCC ATGATGACAG AAATTCTGCT TAAGCAGGCA
ATGGTGGGGA TTGTCGGGAG TATCGGCAGC GCCATTGGCG GGGCTGTTGG TGGCGGCGCA
TCCGCGTCAG GCGGTACAGC CATTCAGGCC GCTGCGGCGA AATTCCATTT TGCAACCGGA
GGATTTACGG GAACCGGCGG CAAATATGAG CCAGCGGGGA TTGTTCACCG TGGTGAATTT
GTCTTCACAA AGGAGGCAAC CAGCCGGATT GGCGTGGGGA ATCTCTACCG GCTGATGCGC
GGCTATGCCA CCGGTGGTTA TGTCGGTACA CCGGGCAGTC TGGCTGACAG CCGGTCGCAG
GCGTCCGGGA CGTTTGAGCA GAATAACCAT GTGGTGATTA ACAACGACGG CACGAACGGG
CAGATAGGTC CGGCTGCTCT GAAGGCGGTG TATGACATGG CCCGCAAGGG TGCCCGTGAT
GAAATTCAGA CACAGATGCG TGATGGTGGA CTGTTCTCCG GAGGTGGACG ATGA
|
|---|
| Protein sequence | MSQPVGDLVI DLSLDAVRFD EQMSRVRRHF SGLDTDARKT ASAVEQGLSR QALAAQKAGI
SVGQYKAAMR TLPAQFTDIA TQLAGGQNPW LILLQQGGQV KDSFGGMIPM FRGLAGAITL
PMVGVTSLAV ATGALAYAWY QGDATLSEFN KTLVLSGNQA GLTADRMLTL SRAGQAAGLT
FNQARESLAA LVNAGVRGGE QFDAINQSVA RFASASGVEV DKVAEAFGKL TTDPTSGLMA
MARQFRNVTA EQIAYVAQLQ RSGDEAGALQ AANDIATKGF DEQTRRLKEN MGTLETWADK
TGKAFKSMWD AILDIGRPES SADMLASAQK AFDEADKKWQ WYQSRSQRRG KTSSFRANLQ
GAWDDRENAR LGLAAATLQS DMEKAGELAA RDRAERESSQ LKYTGEAQKA YERLQTPLDK
YTARQKELNK ALKDGKILQA DYNTLMASAK KDYESTLKKP SGVKVSAGER QEDRAHAALL
ALETELRTLE KHSGVNEKIS QQRRDLWEAE SQYVVLKEAA TKRQLSEQEK SLLAHEKETL
EYKRQLAELG DKIEHQKRLN ELAQQAARFE QQQSAKQAAI SAKARGLTDR QAQRESEEQR
LREVYGDNPA ALAKATSALK NTWSAEEQLR GSWMAGMKSG WSEWEESATD SMSQVKSAAT
QTFDGIAQNM AAMLTGSEQN WRSFTRSVLS MMTEILLKQA MVGIVGSIGS AIGGAVGGGA
SASGGTAIQA AAAKFHFATG GFTGTGGKYE PAGIVHRGEF VFTKEATSRI GVGNLYRLMR
GYATGGYVGT PGSLADSRSQ ASGTFEQNNH VVINNDGTNG QIGPAALKAV YDMARKGARD
EIQTQMRDGG LFSGGGR
|
|---|
| |