Gene SbBS512_E1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1459 
Symbol 
ID6272440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1332874 
End bp1333902 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content53% 
IMG OID641725560 
Productphage major capsid protein E 
Protein accessionYP_001880066 
Protein GI187734000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTGT TTACGACCCG CCAGTTACTC GGTTATACCG AACAAAAAGT GAAATTCCGT 
GCGCTGTTTC TGGAGCTGTT TTTCCGCCGT ACGGTGAATT TCCACACCGA AGAGGTGATG
CTGGACAAAA TTACCGGAAA AACGCCGGTG GCGGCCTATG TCTCCCCGAT CGTTGAAGGA
AAAGTGCTTC GCCATCGCGG TGGTGAAACC CGCGTGTTAC GTCCGGGCTA CGTCAAGCCG
AAACACGAAT TTAATTACCA GCAGGCGGTT GAGCGCCTTC TTGGTGAAGA TCCGGCTCAG
CTGAACGACC CGGCCTACCG TCGTCTGCGT ATCATTACCG ATAACCTCAA ACAGGAAGAG
CACGCCATTG TCCAGGTGGA AGAAATGCAG GCGGTGAATG CCGTGCTGTA TGGCAAATAC
ACCATGGAAG GGGATCAGTT TGATACTGTC GAGGTGGATT TCGGGCGCTC TGAAGGAAAT
AACATTGAGC AGGCTGACGG TAAAAAATGG TCTGAGCAGG ACCGTGATAC GTTTGATCCG
ACGCATGATA TTGACCTCTA CTGCGATCAG GCCAGCGGCC TTGTGAATAT CGCCATTATG
GACGGTACGG TCTGGCGTCT GCTGAATGGC TTTAAGCTGT TCCGCGAAAA ACTGGATACC
CGTCGCGGCT CAAATTCACA ACTCGAAACG GCAGTGAAAG ATCTGGGCGC AGTGGTGTCC
TTCAAGGGGT ATTACGGCGA TCTGGCCATT GTGGTGGCGA AAACGTCTTA TGTGGCAGAG
GACGGTACCG AAAAACGTTA TCTGCCGGAG GGCATGCTGG TGTTGGGGAA TACGGCGGCA
GAGGGGATTC GTTGCTATGG TGCCATTAAG GATGCACAGG CGTTGTCTGA AGGAGTGGTG
GCTTCTTCCC GTTACCCGAA ACACTGGCTG ACCGTGGGCG ATCCGTCCTG TGAATTCACC
ATGACGCAGT CCGCTCCGCT GATGGTGCTG CCGGATCCGG ATGAGTTTGT GGTGGTACAG
GTGAAATAA
 
Protein sequence
MGLFTTRQLL GYTEQKVKFR ALFLELFFRR TVNFHTEEVM LDKITGKTPV AAYVSPIVEG 
KVLRHRGGET RVLRPGYVKP KHEFNYQQAV ERLLGEDPAQ LNDPAYRRLR IITDNLKQEE
HAIVQVEEMQ AVNAVLYGKY TMEGDQFDTV EVDFGRSEGN NIEQADGKKW SEQDRDTFDP
THDIDLYCDQ ASGLVNIAIM DGTVWRLLNG FKLFREKLDT RRGSNSQLET AVKDLGAVVS
FKGYYGDLAI VVAKTSYVAE DGTEKRYLPE GMLVLGNTAA EGIRCYGAIK DAQALSEGVV
ASSRYPKHWL TVGDPSCEFT MTQSAPLMVL PDPDEFVVVQ VK