Gene SbBS512_E1454 details

Gene Information

• Locus tag: SbBS512_E1454
• ID: 6269814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1327230
• End bp: 1329158
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641725555
• Product: phage terminase large subunit (GpA)
• Protein accession: YP_001880061
• Protein GI: 187730353
• COG category: [R] General function prediction only
• COG ID: [COG5525] Bacteriophage tail assembly protein

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTCAG ACGCACAGAA GGCAGCTAAT GCAGCCGGTG CGATAGCTAC AGGGCTTTTA 
TCTCTCATTA TTCCTGTTCC ACTGACGACA GTTCAGTGGG CCAATAAACA TTATTACCTT 
CCTAAAGAGT CGTCTTATAC CCCGGGGCGG TGGGAAACAC TGCCGTTTCA GGTTGGCATC 
ATGAACTGTA TGGGCAACGA TTTGATTCGC ACTGTTAACC TGATTAAATC TGCCCGTGTT 
GGTTATACAA AGATGTTGCT GGGAGTGGAG GCTTATTTTA TTGAGCATAA ATCACGCAAC 
AGCCTTCTTT TTCAGCCCAC GGACTCAGCT GCTGAAGATT TTATGAAATC TCATGTTGAG 
CCAACGATAA GGGATGTTCC TGCATTGCTG GAGCTGGCTC CATGGTTCGG AAGAAAACAC 
CGCGATAATA CGCTCACCCT GAAGCGTTTT TCCTCCGGTG TGGGTTTCTG GTGTCTGGGG 
GGAGCGGCAG CAAAAAACTA CCGTGAAAAA TCCGTGGATG TGGTTTGTTA TGACGAGCTT 
TCCTCGTTCG AACCGGATGT TGAAAAAGAG GGTTCGCCAA CCCTGCTGGG GGATAAACGT 
ATTGAGGGCT CTGTATGGCC AAAATCCATT CGCGGCTCGA CGCCTAAAAT CAAAGGCTCC 
TGCCAGATCG AAAAAGCCGC TAACGAGTCG GCACATTTCA TGCGTTTTTA TGTGCCCTGT 
CCGCACTGTG GGGAGGAGCA GTATCTGAAA TTTGGCGATG ATGCCTCGCC TTTCGGTCTT 
AAGTGGGAGA AGAATAAGCC AGAAAGTGTT TTCTACCTTT GTGAGCATCA TGGCTGTGTG 
ATCCATCAGT CTGAGCTTGA CCAGAGTAAC GGGCGGTGGA TCTGTGAAAA CACGGGCATG 
TGGACTCGTG ACGGTCTGAC ATTTTTCAGC GCCGCGGATA ATGAAATTCC GCCGCCGCGC 
TCCATCACAT TCCATATCTG GACGGCGTAC AGTCCGTTCA CCACCTGGGT ACAGATTGTC 
TATGACTGGC TGGATGCACT GAAAGATCCC AACGGCCTGA AAACCTTTGT GAACACCACG 
CTGGGCGAGA CCTGGGAAGA GGCCGTGGGC GAAAAACTCG ATCACCAGGT GCTGATGGAT 
AAGGTTGTGC GTTACACGGC TGCGGTGCCT TCCCGGGTGG TTTATCTGAC GGCGGGCATT 
GACTCGCAGC GAAACCGTTT TGAGATGTAT GTCTGGGGAT GGGCTCCGGG AGAGGAAGCC 
TTTCTGGTGG ATAAAATCAT CATTATGGGG CGTCCCGATG AGGAAGAGAC GCTGTTACGT 
GTGGATGTGG CGATCAACAA AAAATACCGC CATGCAGACG GAACCGAAAT GACCATTTCC 
CGTGTCTGCT GGGACACCGG GGGGATCGAT GGCGAAATTG TCTATCAGAG GTCAAAAAAA 
CACGGTGTTT TCCGGGTGCT GCCGGTAAAA GGTGCATCTG TTTATGGCAA GCCGGTGATC 
ACCATGCCAA AAACCCGCAA TCAGCGGGGC GTGTATCTGT GCGAAGTGGG GACGGACACC 
GCAAAAGAAA TTCTCTATGC CCGTATGAAA GCCGATCCCA CGCCTGCGGA TGAAGCCACG 
TCGTATGCCA TCCGTTTTCC TGATGATCCG GAGATTTTTT CGCAGACAGA GGCGCAGCAA 
CTGGTGGCGG AAGAGCTTGT GGAGAAGTGG GAAAAAGGAA AGATGCGTCT GCTGTGGGAT 
AACAAAAAGC GGCGTAACGA AGCGCTGGAC TGCCTGGTGT ATGCCTACGC GGCATTACGT 
GTGTCCGTGC AACGCTGGCA GCTTGATCTG GCTGTACTGG CAAAATCCCG GGAAGAAGAG 
ACGACCCGGC CAACCCTTAA AGAACTGGCA GCGAAGCTGT CCGGAGGAGT GAATGGTTAC 
AGTCGCTGA 

 

Protein sequence

MISDAQKAAN AAGAIATGLL SLIIPVPLTT VQWANKHYYL PKESSYTPGR WETLPFQVGI 
MNCMGNDLIR TVNLIKSARV GYTKMLLGVE AYFIEHKSRN SLLFQPTDSA AEDFMKSHVE 
PTIRDVPALL ELAPWFGRKH RDNTLTLKRF SSGVGFWCLG GAAAKNYREK SVDVVCYDEL 
SSFEPDVEKE GSPTLLGDKR IEGSVWPKSI RGSTPKIKGS CQIEKAANES AHFMRFYVPC 
PHCGEEQYLK FGDDASPFGL KWEKNKPESV FYLCEHHGCV IHQSELDQSN GRWICENTGM 
WTRDGLTFFS AADNEIPPPR SITFHIWTAY SPFTTWVQIV YDWLDALKDP NGLKTFVNTT 
LGETWEEAVG EKLDHQVLMD KVVRYTAAVP SRVVYLTAGI DSQRNRFEMY VWGWAPGEEA 
FLVDKIIIMG RPDEEETLLR VDVAINKKYR HADGTEMTIS RVCWDTGGID GEIVYQRSKK 
HGVFRVLPVK GASVYGKPVI TMPKTRNQRG VYLCEVGTDT AKEILYARMK ADPTPADEAT 
SYAIRFPDDP EIFSQTEAQQ LVAEELVEKW EKGKMRLLWD NKKRRNEALD CLVYAYAALR 
VSVQRWQLDL AVLAKSREEE TTRPTLKELA AKLSGGVNGY SR