Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1450 |
Symbol | |
ID | 6271149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1323265 |
End bp | 1323798 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641725551 |
Product | phage lysozyme |
Protein accession | YP_001880057 |
Protein GI | 187731224 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCAA AAATCAAATA CGGCCTGTCA GCTGCTGTTC TGGCGCTGAT TGCTGCAGGC GCGTCTGCTC CTCAAATACT TGACCAGTTT CTGGATGAAA AAGAGGGTAA CCACACTACG GCATACCGCG ATGGTTCCGG TATATGGACC ATCTGTCGTG GTGCCACAAT GGTGGATGGT AAGCCCGTCA TACCGGGAAT GAAGCTGTCG AAGGAAAAAT GCGACCAGGT TAACGCTATT GAACGTGATA AGGCGCTGGC ATGGGTGGAG CGCAATATTA AAGTACCACT GACCGAACCA CAGAAAGCGG GTATAGCGTC ATTATGTCCC TATAACATTG GCCCCGGTAA GTGTTTCCCG TCGACGTTTT ATAAGCGGCT GAATGCCGGT GATCGTAAGG GCGCATGCGA GGCGATTCGC TGGTGGATAA AAGATGGTGG GCGCGATTGC CGCATACGTT CAAATAACTG CTATGGACAG GTTATTCGTC GTGACCAGGA AAGCGCATTA GCCTGTTGGG GGATAGATCA GTGA
|
Protein sequence | MSAKIKYGLS AAVLALIAAG ASAPQILDQF LDEKEGNHTT AYRDGSGIWT ICRGATMVDG KPVIPGMKLS KEKCDQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASLCP YNIGPGKCFP STFYKRLNAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VIRRDQESAL ACWGIDQ
|
| |