Gene SbBS512_E1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1438 
Symbol 
ID6272888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1314015 
End bp1314680 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID641725539 
Producthypothetical protein 
Protein accessionYP_001880048 
Protein GI187733445 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.553594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTG CTGATTTCAA ACGGCCTAAA TTGGAGCTCC CAAACGGGGC AAACAAACTA 
CTACTGCACT CTTGCTGTGC TCCATGTTCC GGTGAAGTGA TGGAGGCGCT TCAGGCCTCG 
GGAATCGACT ACACCATCTT TTTCTACAAC CCGAACATTC ATCCTCAGAA AGAGTATTTA 
ATTCGTAAGG ATGAAAATAT TCGCTTTGCT GAACAACACG GCGTGCCGTT TATCGATGCT 
GATTACGACA CCGACAACTG GTTTGAACGT GCCAAAGGAA TGGAATGGGA GCCTGAGAGG 
GGGATCCGTT GTACCATGTG TTTTGACATG CGTTTTGAGC GGACAGCGTT GTACGCTGCT 
GAAAATGGTT TCAGTGTGAT CAGCAGTTCA CTGGGCATTT CACGCTGGAA AAATATGCAG 
CAGGTTAACG AGTGTGGGCG GCGAGCTGTT GCGCATTATC CGGGTATGGT GTACTGGGAT 
TATAACTGGC GCAAGCAGGG CGGCTCGTCC CGTATGATTG AAATCAGCAA GCGCGAAAAA 
TTCTATCAGC AGGAATATTG TGGCTGTGTG TATTCTCTGC GCGATACCAA TCTACACCGC 
AAATCTCAGG GACGCCCTCT TATCAAAATT GGCCAACTCC ACTACGGAAA AGAAGAGAAG 
GAGTGA
 
Protein sequence
MTIADFKRPK LELPNGANKL LLHSCCAPCS GEVMEALQAS GIDYTIFFYN PNIHPQKEYL 
IRKDENIRFA EQHGVPFIDA DYDTDNWFER AKGMEWEPER GIRCTMCFDM RFERTALYAA 
ENGFSVISSS LGISRWKNMQ QVNECGRRAV AHYPGMVYWD YNWRKQGGSS RMIEISKREK 
FYQQEYCGCV YSLRDTNLHR KSQGRPLIKI GQLHYGKEEK E