| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1433 |
|---|
| Symbol | |
|---|
| ID | 6270280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 1310892 |
|---|
| End bp | 1311854 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641725534 |
|---|
| Product | phage O protein family |
|---|
| Protein accession | YP_001880043 |
|---|
| Protein GI | 187730880 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000630558 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA AGCTTCATGG TCTTGTCTGG GAAGGGTGCG CCTTCACCGG CATGATCTTA
TCCAGGGTGG CGGTTATGGC CCGTCTTGCA GACTACAGCA ATGACGAGGG CGTGTCATGG
CCTGCCATTG AAACTATCCG GCGTCAGATC GGTGCAAGAA GTGAATCCAC AGTGAAATCG
GCTATTGCAG AACTGGCGAA AGAGGGCTGG CTGACGAAGG AAGAGCGTAA GGTCGGTGGG
CGTAATGTAA GCAATATCTA TCGGCTTAAT GTGGAAAAAC TCGAAGCAGC TGCGGCGGCG
GCGCGTGAGT CATATAAACC GAAAAGAAAA ATTAGCCCGG CAAAAAATGA CCCGTTAACA
GTTGACCCGT CAAATATTGA CCCCTCAACG GTTGACCCGT CAAATTTTGA TGGATCAACT
GTTGATAAAA AACTGCCGAT TAGGGGGGCG ATGATTGACC CCGATCCGTC AGTATTAAAA
CCTGATCCGT CAGATAAAAG ATCTTCTTGT CCGGACGCTT CGCAACCGGA CCCGCAGACG
GCTGAACAGG ATTTTTTAAC CCGACACCCT GACGCGGTTG TGTTCAGTGC GAAAAAACGC
CAGTGGGGAA GTCAGGAAGA TTTGGTGTGC GCACAGTGGA TCTGGGGACG AATCGTGAGT
CTTTACGAGC AGGCGGCCAG CTATGATGGC GAGATCACTA GACCGAAAGA ACCCAACTGG
ACAGCATGGG CCAATGACGT TCGCACAATG CGGATGCTGG ATGGCAGAAC TCACAGACAA
ATTTGTGAAA TGTTTGGGCG TCTCCAGCGG GATTCGTTCT GGGTAAAAAA CATCATGAGT
CCGGCAAAAC TCCGGGAAAA ATGGGATGAA CTGGTTATCC GCCTGGGGCG TTCGCCTGCG
CAGCGTTGCG TGAATCACAT TTCTGAACCG GACACTGAAA TACCGCCGGG ATTCAGGGGG
TGA
|
|---|
| Protein sequence | MSSKLHGLVW EGCAFTGMIL SRVAVMARLA DYSNDEGVSW PAIETIRRQI GARSESTVKS
AIAELAKEGW LTKEERKVGG RNVSNIYRLN VEKLEAAAAA ARESYKPKRK ISPAKNDPLT
VDPSNIDPST VDPSNFDGST VDKKLPIRGA MIDPDPSVLK PDPSDKRSSC PDASQPDPQT
AEQDFLTRHP DAVVFSAKKR QWGSQEDLVC AQWIWGRIVS LYEQAASYDG EITRPKEPNW
TAWANDVRTM RMLDGRTHRQ ICEMFGRLQR DSFWVKNIMS PAKLREKWDE LVIRLGRSPA
QRCVNHISEP DTEIPPGFRG
|
|---|
| |