Gene SbBS512_E1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1425 
SymbolompW 
ID6270592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1302973 
End bp1303611 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID641725526 
Productouter membrane protein W 
Protein accessionYP_001880035 
Protein GI187730073 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0528971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TAACAGTGGC GGCTTTGGCA GTAACAACTC TTCTCTCTGG CAGTGCCTTT 
GCGCATGAAG CAGGCGAATT TTTTATGCGT GCAGGTTCTG CAACCGTACG TCCAACAGAA 
GGTGCTGGTG GTACGTTAGG AAGTCTGGGT GGATTCAGCG TGACCAATAA CACTCAACTG 
GGCTTGACGT TTACTTATAT GGCGACCGAC AACATTGGTG TGGAATTACT GGCAGCGACG 
CCGTTCCGCC ATAAAATCGG CACCCGGGCG ACCGGCGATA TTGCAACCGT TCACCATCTG 
CCACCAACAC TGATGGCGCA GTGGTATTTT GGTGATGCCA GCAGCAAATT CCGTCCTTAC 
GTTGGGGCAG GTATTAACTA CACCACCTTC TTTGATAATG GATTTAACGA TCATGGCAAA 
GAGGCAGGGC TTTCCGATCT CAGTCTGAAA GATTCCTGGG GAGCTGCCGG GCAGGTGGGG 
GTTGATTATC TGATTAACCG TGACTGGTTG GTTAACATGT CAGTGTGGTA CATGGATATC 
GATACCACGG CTAAGTACAA ATCTGGTGTT ACTACCGTAA AAGACTCGGT ACGACTGGAT 
CCGTGGGTGT TTATGTTCTC CGCAGGATAT CGTTTTTAA
 
Protein sequence
MKKLTVAALA VTTLLSGSAF AHEAGEFFMR AGSATVRPTE GAGGTLGSLG GFSVTNNTQL 
GLTFTYMATD NIGVELLAAT PFRHKIGTRA TGDIATVHHL PPTLMAQWYF GDASSKFRPY 
VGAGINYTTF FDNGFNDHGK EAGLSDLSLK DSWGAAGQVG VDYLINRDWL VNMSVWYMDI 
DTTAKYKSGV TTVKDSVRLD PWVFMFSAGY RF