| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1414 |
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| Symbol | oppC |
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| ID | 6273279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1292787 |
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| End bp | 1293695 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641725516 |
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| Product | oligopeptide ABC transporter, permease protein OppC |
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| Protein accession | YP_001880025 |
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| Protein GI | 187732310 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.585769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTTAA GTAAGAAAAA CAGCGAGACG CTGGAAAATT TCAGTGAAAA GCTGGAGGTC
GAAGGGCGCA GCTTGTGGCA GGACGCACGT CGACGTTTTA TTCATAACCG TGCGGCGGTT
GCCAGTCTGA TGGTGCTGGT GCTGATCGCG TTATTTGTAA TCCTGGCACC GATGCTTTCC
CAGTTTGCCT ATGACGATAC TGACTGGGCG ATGATGTCCA GCGCCCCGGA TATGGAGTCC
GGTCACTACT TTGGTACTGA CTCATCCGGT CGCGACCTGC TTGTGCGCGT TGCGATTGGT
GGGCGTATCT CACTCATGGT CGGTGTTGCT GCGGCACTGG TGGCTGTGGT CGTCGGGACA
CTTTATGGTT CGCTTTCCGG TTATCTGGGC GGTAAAGTGG ATTCGGTAAT GATGCGTCTG
CTGGAAATCC TCAACTCCTT CCCATTCATG TTCTTCGTCA TTTTGCTGGT GACCTTTTTC
GGTCAAAACA TCCTGCTGAT TTTCGTGGCG ATAGGCATGG TTTCCTGGCT GGATATGGCT
CGTATTGTGC GTGGGCAAAC CCTGAGTCTG AAGCGCAAAG AGTTTATTGA GGCGGCACAA
GTTGGCGGTG TATCGACATC GGGCATTGTT ATTCGCCACA TTGTGCCGAA TGTACTCGGT
GTGGTGGTGG TCTACGCATC ACTTCTGGTG CCCAGCATGA TCCTCTTTGA ATCTTTCCTT
AGCTTCCTGG GGTTGGGTAC GCAAGAGCCG TTAAGCAGCT GGGGTGCATT GCTGAGTGAT
GGCGCGAACT CGATGGAAGT CTCTCCATGG TTATTGTTGT TCCCAGCGGG ATTCCTCGTG
GTGACGCTGT TTTGTTTCAA CTTTATCGGC GATGGCTTGC GTGATGCCCT CGACCCGAAA
GATCGTTAA
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| Protein sequence | MMLSKKNSET LENFSEKLEV EGRSLWQDAR RRFIHNRAAV ASLMVLVLIA LFVILAPMLS
QFAYDDTDWA MMSSAPDMES GHYFGTDSSG RDLLVRVAIG GRISLMVGVA AALVAVVVGT
LYGSLSGYLG GKVDSVMMRL LEILNSFPFM FFVILLVTFF GQNILLIFVA IGMVSWLDMA
RIVRGQTLSL KRKEFIEAAQ VGGVSTSGIV IRHIVPNVLG VVVVYASLLV PSMILFESFL
SFLGLGTQEP LSSWGALLSD GANSMEVSPW LLLFPAGFLV VTLFCFNFIG DGLRDALDPK
DR
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