Gene SbBS512_E1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1403 
Symboltdk 
ID6272231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1282419 
End bp1283036 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content42% 
IMG OID641725508 
Productthymidine kinase 
Protein accessionYP_001880017 
Protein GI187730341 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.63011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGC TATATTTCTA CTATTCCGCA ATGAATGCGG GTAAGTCTAC AGCATTGTTG 
CAATCTTCAT ATAATTACCA AGAACGCGGC ATGCGCACTG TCGTATATAC GGCAGAAATT 
GATGATCGCT TTGGTGCCGG GAAAGTCAGT TCGCGTATAG GTTTGTCATC GCCTGCAAAA 
TTATTTAACC AAAATTCATC ATTATTTGAT GAGATTCGTG CGGAACATGA ACAGCAGGCA 
ATTCATTGCG TACTGGTTGA TGAATGCCAG TTTTTAACCA GACAACAAGT ATATGAATTA 
TCGGAGGTTG TCGATCAACT CGATATACCC GTACTTTGTT ATGGTTTACG TACCGATTTT 
CGAGGTGAAT TATTTATTGG CAGCCAATAC TTACTGGCAT GGTCCGACAA ACTGGTTGAA 
TTAAAAACCA TCTGTTTTTG TGGCCGTAAA GCAAGCATGG TGCTGCGTCT TGATCAAGCA 
GGCAGACCTT ATAACGAAGG TGAGCAGGTG GTAATTGGTG ATAATGAACG ATACGTTTCT 
GTATGCCGTA AACACTATAA AGAGGCGTTA CAAGTCGGCT CATTAACGGC TATTCAGGAA 
AGGCATCGCC ACGATTAA
 
Protein sequence
MAQLYFYYSA MNAGKSTALL QSSYNYQERG MRTVVYTAEI DDRFGAGKVS SRIGLSSPAK 
LFNQNSSLFD EIRAEHEQQA IHCVLVDECQ FLTRQQVYEL SEVVDQLDIP VLCYGLRTDF 
RGELFIGSQY LLAWSDKLVE LKTICFCGRK ASMVLRLDQA GRPYNEGEQV VIGDNERYVS 
VCRKHYKEAL QVGSLTAIQE RHRHD